Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1532 ATGGGGAAAGGAAGAGCACCATGTTGTGATAAGACTCAAGTTAAGAGAGGACCATGGAGCCCTGAAGAAGACCTCAAGCTCACAGCTTTCATTCAGAAAAATGGCCATGAAAATTGGAGATCTCTCCCCAAACAATCAGGGCTTCTGAGATGTGGGAAAAGTTGTCGTTTGAGATGGATCAATTATCTTAGACCTGATGTAAAGAGAGGCAATTTTACAATACAAGAAGAAGAAGCCATAATAAGGCTACATAAGGAATTTGGAAACAAGTGGTCAAAGATTGCATCGTGTTTGTCTGGTAGGACCGACAATGAGATCAAGAATGTGTGGAACACACACTTAAAGAAAAGATTGAGTTTCAAAAATTCAGAATCTAGTGAAAATATATCCAAGCATGAATCATCAATAACTTCATCCTCATCATCTTCATCCTCATCATTGTCCTCAAATGAGGCACCAAATATAGCAGCAAAGACTATTCCTAGTAATGAACTGAATGAGCAAGCAACCCTAGAAACAATGAATGATAAAATTGAACAAGATTCAGAAAAACAAATTTCTAATGAGGTTATTAGCATCACTGAGGACCAAAAAGAGTTATCAACTTCACTCTCTTTTGTTGAATCAAATAACCTTAACTCAAGCAACATTGTTGTCTTCACACCAGAACAACAATTGTTTTCTCCATTAACCTATCTAGAACTCTATGATGTTGACAATAATAATACATTACAAGAGATTGATAAACCAAACCATCTTAATGAAATACCATGGGATTTAGATGATGATTTATGGAAGATGATAGATAACTTTGTATCATTGCAATCAAATGAAGTCCAATTAGAGGGGGTCCCATCCAACCAAATCCAAGATCCTATACAAGAAAGTGTTCAAGATGTTGAAACCATGAAGTGGTCCCATGAATTTGATAATATGTTTGGACTAGTAGGTGAAACAAATGAGTCTAACAATGATGGGTTTCTACCAAAGAATTATGCAGCTGAACTAAGAGTGGACCCTCAGACATTTGATTTGGATGTTATGGAAAGGTCAGAATCTGAATTAGACTTGAGTTATATTCAATTATGGCTAATGACCTGA 1101 0.3606 MGKGRAPCCDKTQVKRGPWSPEEDLKLTAFIQKNGHENWRSLPKQSGLLRCGKSCRLRWINYLRPDVKRGNFTIQEEEAIIRLHKEFGNKWSKIASCLSGRTDNEIKNVWNTHLKKRLSFKNSESSENISKHESSITSSSSSSSSSLSSNEAPNIAAKTIPSNELNEQATLETMNDKIEQDSEKQISNEVISITEDQKELSTSLSFVESNNLNSSNIVVFTPEQQLFSPLTYLELYDVDNNNTLQEIDKPNHLNEIPWDLDDDLWKMIDNFVSLQSNEVQLEGVPSNQIQDPIQESVQDVETMKWSHEFDNMFGLVGETNESNNDGFLPKNYAAELRVDPQTFDLDVMERSESELDLSYIQLWLMT 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1532 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Lal11g1532 366 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 324 - -
Lal11g1532 366 Gene3D - 71 144 - -
Lal11g1532 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Lal11g1532 366 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Lal11g1532 366 MobiDBLite consensus disorder prediction 129 166 - -
Lal11g1532 366 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Lal11g1532 366 Gene3D - 16 68 - -
Lal11g1532 366 SMART sant 15 65 IPR001005 -
Lal11g1532 366 SMART sant 68 116 IPR001005 -
Lal11g1532 366 CDD SANT 71 114 IPR001005 -
Lal11g1532 366 CDD SANT 18 63 IPR001005 -
Lal11g1532 366 MobiDBLite consensus disorder prediction 121 166 - -
Lal11g1532 366 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Lal11g1532 366 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Lal11g1532 366 PANTHER - 1 324 - -
Lal11g1532 366 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1532 Lal-Chr11 18473050 18476425 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal11g1532 Myb_DNA-binding 4e-12 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1532 11 18473050 18476425 Lal11g1532 11 18473050 18476425 ECH