Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1496 ATGTCATCAAAATCAGCAACAGAACAATACACCTATGTCAGAAACTGCAAACAAACCACATTTTCTTCAGGAATTCCTCTAGTGGACTTATCAAAACCTGATGCAAAGAGCCTCATAGTGAATGCTTGTGAAGAATTTGGATTCTTCAAAGTCATAAATCATTGTGTTCCTATGGAAGCTATATCCATGTTGGAATCTGAAGCCATGAACTTTTTCTCTATGCCTATCATTGAGAAAGAAAAAGCTGGTCCTGCAAATCCATTTGGTTATGGCAACAAGAGTATTGGAAATAGTGGTGATGTTGGTTGGGTTGAATATCTTCTTCTCAAAACCAATCAAGAACACAATTCTTCAACACTTTCCTCTGCTTTTGGACAGAACAGAGAAAAATTTAGGAGTGTGTTGAATGAATACATGTGTGGTGTGAGGAAAATGGGATGTGAGATTCTTGATTTGATGGGAGAAGGATTGAACATTCAGCCAAAGAATGTGTTTAGTAAGCTTTTGATGGACAAAGAAAGTGATTGTTTATTTAGGGTGAATCACTACCCTGCTTGTCCTAAGAAAAATGAGAATGAGAATATGATTGGTTTTGGAGAGCACACAGACCCACAAATCATTTCTCTTTTGAGGTCTAACAACACTTCTGGACTTCAAATTTCTCTAATGGATGGAAGCTGGATTTCAGTACCACCAGATCATAGTTCATTCTTCATCAATGTTGGTGATTCTCTTCAGGTTATGACGAATGGAAGGTTCAGGAGTGTGAGGCACAGAGTTGTGGCAAATGGGTCCAAATCAAGGCTTTCAATGATTTACTTTGTTGGTCCACCACTGAGTGAGAAGATAGCACCATTGCCTTCTCTTATGAAAGGAAATGAAAGCCTATACAAAGAGTTTACGTGGTTTGAGTACAAGAATTCTATTTATGGTTCAAGATTGGCTGATAATAGACTTGGACACTTTGAAAGAATTGCAGCCTCATAA 987 0.3789 MSSKSATEQYTYVRNCKQTTFSSGIPLVDLSKPDAKSLIVNACEEFGFFKVINHCVPMEAISMLESEAMNFFSMPIIEKEKAGPANPFGYGNKSIGNSGDVGWVEYLLLKTNQEHNSSTLSSAFGQNREKFRSVLNEYMCGVRKMGCEILDLMGEGLNIQPKNVFSKLLMDKESDCLFRVNHYPACPKKNENENMIGFGEHTDPQIISLLRSNNTSGLQISLMDGSWISVPPDHSSFFINVGDSLQVMTNGRFRSVRHRVVANGSKSRLSMIYFVGPPLSEKIAPLPSLMKGNESLYKEFTWFEYKNSIYGSRLADNRLGHFERIAAS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1496 328 Pfam non-haem dioxygenase in morphine synthesis N-terminal 25 114 IPR026992 -
Lal11g1496 328 Pfam 2OG-Fe(II) oxygenase superfamily 175 277 IPR044861 -
Lal11g1496 328 SUPERFAMILY Clavaminate synthase-like 11 316 - -
Lal11g1496 328 Gene3D - 2 307 IPR027443 -
Lal11g1496 328 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 1 6 325 - -
Lal11g1496 328 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 6 325 - -
Lal11g1496 328 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 172 277 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1496 Lal-Chr11 18182167 18184187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1496 42 305 Glycosyltransferase AT5G59530 28.000 3.21e-23 97.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0416 20 3341463 3345235 Lal11g1496 11 18182167 18184187 LSH