Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1490 ATGGATATAACTGAAGTTTCAATCTTGCATCATGTGGCAATCATGCTAATAGGGATTTGGCTTCTATCTGCTTACAATTTGTGCCACTCTGTTGTTTATTTTGTAGCTTTGATCTATTTATATCTGGTTCATGAGCGTTATGTTACAAGGCTTAGGAGGAAGTTGCAGTTTGAGGAGAGGAAACAATCTAATCAAAGAAGGGTGCTTTCTGATTCTGAAACAGTTCGGTGGTTGAACCACGCAATTGAAAACATATGGCCCATATGTATGGAACAAATTGCATCTCAGAAGATTTTGCTCCCTATCATACCATGGTTCTTAGAGAAGTACAAACCTTGGACTGCTAAAGAAGCTGTTGTTCAGCACCTTTACTTGGGAAGAAATCCCCCTTTGATTACTGAAATTAGGGTACTTCGCCAGAGTAATGATGACCACTTGGTTCTGGAGTTAGGAATGAATTTTCTCACAGCTGACGATATGAGTGCAATACTTGCTGTGAAACTAAGAAAAAGACTGGGCTTTGGAATGACGACAAAGCTGCACATAACGGGAATGCATGTTGAAGGAAAGGTCTTGGTTGGGGTGAAGTTTATCCGGACAATGCCTTTCCTTAGCCGTGTGCGTGTATGCTTTGTTGAACCCCCATATTTCCAAATGACTGTCAAACCTATATTTACTCATGGGCTTGATGTGACAGAACTTCCAGGGATTGCTGGGTGGCTAGATAAGCTTCTGTCTATTGCTTTTGAGCAGAGTCTTGTCGAGCCTAATATGCTGGTTGTTGATGTTGAGAAATTTATCTCACCACAGGCAGAGCCTTGGTTCTCCGTGGATGAGAAGGACCCTATTGCTTATGCGAAAGTAGAGGTCATTGAAGCATCTGACTTGAAGTCAGCAGATCTAAATGGATTATCGGATCCTTATGTGAAAGGTCACTTGGGTGGATACAGATTCAGGACAGAGATACAAAAGAAAACACTTACTCCAAAATGGCATGAGGAATTTAAAATTCCCATCATAACTTGGGAGTGTAACAATCTGTTGGCTATTGCAGTTCTTGACAAGGACCGTTTCTATGATGATACCCTTGGGGATTGTTCTGTGGATATCAATGATTTGAGGGATGGACAAAGGCATGATATGTGGCTGCCGCTTGAGAACATAAAAACGGGGAGGTTACATCTAGCAGTAACTATTCTTGAAGACAATGGAAAGGGGTTTGATACAAATGACCAGGAATCATTGGACAACGTAGAAATAAAAAATTCATTTGCCGATGACACTTCTAACAAAGGTTCTTTTAAAAGTGGCTCTACTAATAAAAATTCCTCTTCACCCACTCCATCTGAAAAATCTCCAAAGGTGGCAGATAACTATGAGCCTATAGATGTCGAAGGGCAAAAGGAGACGGGAATTTGGGTTCATCACCCAGGAAGTGAAGTTTCCCAAACCTGGGAGCCTAGAAAAGGGAGGAACCGACGCCTTGATACTGAAATTCGCAAGGAGCCTAATGATTCATTCGGAAGTTGTAATTCAACAACAGCATCTGGACCGTTGGACAATGACAGCAGCAGTCCCGATAGTAATCCAGAAGATAAGCATCGAATGAAAACAGTTAGGAAGGGCTTGCACAAGATTGGTTCAGTATTTCGCAGGAATCATAAAAAGGAGGATCAGTTAGGTTGTGTTGATGAGGAGTTCCCATCTCCACATGACAACATTAGGTCAGTCAAGACCAAGGGGGAGATTGGGCTGAAGTTTGTCATGGAGGATAACATTTCTGGTTTTCCCGCTGGTAAGCTTCAGGCAGAAGCCGGTTCAAATGAAGGTAGTGTTCCCGAGAGCCCAAACAAAGGACATGTTAAGGATATGGCGAAGAATATTTTTAAACATGCAGGAAAATCGGCTCGAAGCTTAAAGCACGTTCTTTCCCGTAAATCAAGGAACTCTAAATCTGATGCATCGGCAGTCATGTCAGATGAATCTGATGACTCTTCTGCAGTATCTCCTGCAGTCCAGTCACCTATAGATGAAAGAATTCTAGTTGCTTCCCAGGCCATGGCCTCATCTAGCAATGGTTCACCGAAGCCCAAAGTAATTGTGGTTCAGACAGTTCCATCTAACACTACTGTGGACAATGGAGCCCAAGTGAAGAATGAGAACCTTGAAGAGAACCCTGTAAAGACACTCTCCCTTGAAGAGAACCCTGTAAAGACACTCTCCCTTGAAGAGAACCCTGTAAAGACACTCTCCCTTGAAGAGAACCCTGGTGAAGAATTTATTAGATCTGTTGAACTAAAGCCTGAAGAGGAAATGGTGGCAGATAAAAATGATATCAGTTTGTCCAACTGA 2352 0.4235 MDITEVSILHHVAIMLIGIWLLSAYNLCHSVVYFVALIYLYLVHERYVTRLRRKLQFEERKQSNQRRVLSDSETVRWLNHAIENIWPICMEQIASQKILLPIIPWFLEKYKPWTAKEAVVQHLYLGRNPPLITEIRVLRQSNDDHLVLELGMNFLTADDMSAILAVKLRKRLGFGMTTKLHITGMHVEGKVLVGVKFIRTMPFLSRVRVCFVEPPYFQMTVKPIFTHGLDVTELPGIAGWLDKLLSIAFEQSLVEPNMLVVDVEKFISPQAEPWFSVDEKDPIAYAKVEVIEASDLKSADLNGLSDPYVKGHLGGYRFRTEIQKKTLTPKWHEEFKIPIITWECNNLLAIAVLDKDRFYDDTLGDCSVDINDLRDGQRHDMWLPLENIKTGRLHLAVTILEDNGKGFDTNDQESLDNVEIKNSFADDTSNKGSFKSGSTNKNSSSPTPSEKSPKVADNYEPIDVEGQKETGIWVHHPGSEVSQTWEPRKGRNRRLDTEIRKEPNDSFGSCNSTTASGPLDNDSSSPDSNPEDKHRMKTVRKGLHKIGSVFRRNHKKEDQLGCVDEEFPSPHDNIRSVKTKGEIGLKFVMEDNISGFPAGKLQAEAGSNEGSVPESPNKGHVKDMAKNIFKHAGKSARSLKHVLSRKSRNSKSDASAVMSDESDDSSAVSPAVQSPIDERILVASQAMASSSNGSPKPKVIVVQTVPSNTTVDNGAQVKNENLEENPVKTLSLEENPVKTLSLEENPVKTLSLEENPGEEFIRSVELKPEEEMVADKNDISLSN 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1490 783 MobiDBLite consensus disorder prediction 476 535 - -
Lal11g1490 783 MobiDBLite consensus disorder prediction 426 457 - -
Lal11g1490 783 MobiDBLite consensus disorder prediction 426 452 - -
Lal11g1490 783 MobiDBLite consensus disorder prediction 632 673 - -
Lal11g1490 783 Pfam C2 domain 287 385 IPR000008 -
Lal11g1490 783 SMART C2_3c 285 382 IPR000008 -
Lal11g1490 783 CDD C2 287 385 - -
Lal11g1490 783 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 5 670 - -
Lal11g1490 783 PRINTS C2 domain signature 301 313 IPR000008 -
Lal11g1490 783 PRINTS C2 domain signature 325 338 IPR000008 -
Lal11g1490 783 PRINTS C2 domain signature 348 356 IPR000008 -
Lal11g1490 783 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 5 670 - -
Lal11g1490 783 MobiDBLite consensus disorder prediction 486 503 - -
Lal11g1490 783 MobiDBLite consensus disorder prediction 504 525 - -
Lal11g1490 783 Gene3D C2 domain 272 401 IPR035892 -
Lal11g1490 783 ProSiteProfiles C2 domain profile. 269 383 IPR000008 -
Lal11g1490 783 MobiDBLite consensus disorder prediction 649 672 - -
Lal11g1490 783 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 71 264 IPR031468 GO:0008289
Lal11g1490 783 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 277 401 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1490 Lal-Chr11 18100268 18106554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1490 278 436 Lipid Metabolism Gene Families AT3G61300 28.049 7.68e-11 63.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1490 11 18100268 18106554 Lal1g1579 1 18180800 18188260 LSH