Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0555 ATGGCTGTAGTACAAAAAGGCCAAGAGAGTCAAGGGATTAAGCTCTTCGGCGCAACAATTAAATATGGTGACGAAAAAATAAAGGAGAGGGAAAAAGGAAAAGAAGATGAAACAGTGGAAAAGAAACAAGAGAAGATAAAAGCGTGCCCAAGATGCAAGAGCATGGAAACCAAGTTCTGTTACTTCAACAACTACAACGTGAATCAGCCAAGGCATTTCTGTAAGGGTTGCCAAAGGTACTGGACGGCAGGTGGGGCCCTCCGCAACGTGCCGGTTGGTGCCGGGCGGCGGAAGGCTAAGCCACCGTGTCATGGTGGATTCCAGGATGGTGGCTTCTATGAAAGATCAAATGATGAGGAGAAGTTTGGGTTGGTTTTGGATGAGTGGCAAGTTGCCATGCCACAAAGTGATTTCCGGCAGCCTTTTACGGCCAAGCGGCTGAGGATGAGCTCAGCACAGCATCAAAGTCAATAA 474 0.4789 MAVVQKGQESQGIKLFGATIKYGDEKIKEREKGKEDETVEKKQEKIKACPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKAKPPCHGGFQDGGFYERSNDEEKFGLVLDEWQVAMPQSDFRQPFTAKRLRMSSAQHQSQ 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0555 157 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 2 153 - -
Lal11g0555 157 ProSitePatterns Zinc finger Dof-type signature. 49 85 IPR003851 GO:0003677|GO:0006355
Lal11g0555 157 ProSiteProfiles Zinc finger Dof-type profile. 47 101 IPR003851 GO:0003677|GO:0006355
Lal11g0555 157 PANTHER CYCLIC DOF FACTOR 2 2 153 IPR045174 GO:0003700|GO:0006355
Lal11g0555 157 Pfam Dof domain, zinc finger 45 100 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0555 Lal-Chr11 4498997 4501564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0555 8 151 C2C2-Dof Transcription Factor Family AT2G34140 55.488 5.60e-54 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lal11g0555 zf-Dof 1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0555 - - gmx:100820604 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0555 11 4498997 4501564 Lal11g0555 11 4498997 4501564 ECH