Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1244 ATGGATCCTTATAGTGGACAACATCAGCAAATTATGTCTAGCCAATTACTTAAGAACATGTTAACCAGCTCAAATTCACAGCAAGAGAGGAAGCCAAGATCTCAGGTAGAACAAGCACTGAAATGCCCAAGATGTGACTCCACCAACACCAAGTTTTGTTACTACAATAATTACAGTCTTTCTCAACCAAGGTATTTCTGCAAGTCATGCAAGAGATATTGGACCAAAGGAGGAACACTGAGGAATGTTCCAGTTGGTGGTGGATGTAGAAAAGCAAAGAGGTCTTCATCTTCATCATCATCATCATCGTCAAAGAAAGCTACTCAAGATCAAACATTCACACCCAAAGATCCTAACCCACTCAACAACTTTCCTCATTTGGGTTTTGACAACCATGATCTTTCAATCTTGGGGAACCCAACAAACTCACTTTGTGACATTCTTGGCAAAAATGCCATGAACCCTTCAACAACCAATAATGGATTGTTTGATACACTTAGAAGTGGGTTCCTTGGAACACAGAACAATAATAATGGTCAGAATATGTATTATGTGTATGGGAATGGGGACATAGGAGAGATGGATAATGGTAAAAGTGGAATGATGATGCTACCTTATCATCAAGAAATGAGGGTCAGTGCTAAGAAGCAAGAACAAAGTGGAGGTAGGGTGTTGGGAGGTTTCCCATGGCAACTTAGGGGAGAAACAAACATGGGTGAAGTTGATTCAGGAATAACAAGTTGGAATGGTTTCACATCATCTTTGCATGGCCTTCTCCTTAGTCCCCTAATATAA 795 0.4025 MDPYSGQHQQIMSSQLLKNMLTSSNSQQERKPRSQVEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCKRYWTKGGTLRNVPVGGGCRKAKRSSSSSSSSSSKKATQDQTFTPKDPNPLNNFPHLGFDNHDLSILGNPTNSLCDILGKNAMNPSTTNNGLFDTLRSGFLGTQNNNNGQNMYYVYGNGDIGEMDNGKSGMMMLPYHQEMRVSAKKQEQSGGRVLGGFPWQLRGETNMGEVDSGITSWNGFTSSLHGLLLSPLI 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1244 264 MobiDBLite consensus disorder prediction 92 119 - -
Lal10g1244 264 MobiDBLite consensus disorder prediction 85 125 - -
Lal10g1244 264 PANTHER DOF ZINC FINGER PROTEIN DOF3.2-LIKE 8 263 - -
Lal10g1244 264 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
Lal10g1244 264 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
Lal10g1244 264 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 8 263 IPR045174 GO:0003700|GO:0006355
Lal10g1244 264 MobiDBLite consensus disorder prediction 20 40 - -
Lal10g1244 264 Pfam Dof domain, zinc finger 38 94 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1244 Lal-Chr10 18710020 18711582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1244 25 248 C2C2-Dof Transcription Factor Family AT5G60200 39.130 2.06e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lal10g1244 zf-Dof 5.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1244 - - lang:109342737 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1244 10 18710020 18711582 Lal10g1244 10 18710020 18711582 ECH
Lal10g1244 10 18710020 18711582 Lal1g0363 1 2195827 2197520 PCT
Lal10g1244 10 18710020 18711582 Lal9g0256 9 1598390 1600856 PCT
Lal1g0363 1 2195827 2197520 Lal10g1244 10 18710020 18711582 PCT
Lal9g0256 9 1598390 1600856 Lal10g1244 10 18710020 18711582 PCT