Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0972 ATGAAGAATAATGAGCAAGAACGTTTCATTGCATCCTCATATCTTAAACTCTTCACTTTTCACCAATACTATCTCTTCAACTTCTTCACTCATATTCTAACCTTTGGCTTTGGTTTAATCATTGGTATTATACTCACTTTCTATCTTAACAAAACCTTCTACCTCAATTTTCAACTTCAACCATTTTTACTCCCATCTTTTGGACTCAAACCACCTTTGTTAACATCTCCACCTTATATTCCAATACTCTCAACAAACATAAATGTTTCAATGAGTAATCACAAAAGGGTCATTGAAAACTCCAAAACCAGAAAAGGGTTGAGTGATTTCTTGAAGCCTCCAATGAGCATGCATGATATGAGTGATGATGAATTGCTTTGGAGGGCTTCTATAGTTCCAAAGATTCAACAACCACCATTTAAACATACCCCAAAGGTGGCATTTATGTTCTTAACAAAAGGTCCTGTGTTATTGGCTCCACTATGGGAGAGATTCTTCAAGGGGAATAAAGGGTTGTTTTCTATTTATGTACATTCTCAACCTTCTTTCAATGGAACAGTGCCTCAAAGTTCTATTTTCCATGGCCGAAGAATCCCTAGCAAGGAGGTAAGGTGGGGTGAGAATAGCATGATAGAGGCAGAGAGACGTTTACTAGCCAATGCACTTCTTGACTTCTCAAATCAACGTTTTGTTTTGCTCTCAGAATCATGCATTCCTTTATTTAATTTCTCTACAATATACACTTATCTTATGAACTCAACCAAAACCTTTGTAGAAGCCTATGATCTACTTGGTTTAGTAGGGCGTGGTAGGTATAGTCCTAAAATGATGCCACAAGTTAAGCTTTCCCAATGGAGGAAGGGCTCCCAATGGTTCCAAATCGACCGTGAACTCGCGGTCGAAATCGTGTCGGATAAGCTATATTACATGGTGTTCAAGAAGTATTGTAACCCTGATTGCTATAGTGATGAACACTACTTGCCAACATTGGTTAGTATCAAATTTTGGAAGAGGAACTCAAATAGGACTTTGACATGGGTTGATTGGTCAAGGGGTGGACCTCATCCATCAAGGTATATAAGAACAGATGTTACTATTGATTTTTTGATGTATCTTAGGAATGGAACAACATGTGAGTATAATGGACATAACATCAATATTTGTCATTTGTTTGCAAGAAAATTCACAACTCATGCTTTGGATAGATTGATGAGGTTCGCTCCAAAGATAATGCAATTCAATTGA 1245 0.3735 MKNNEQERFIASSYLKLFTFHQYYLFNFFTHILTFGFGLIIGIILTFYLNKTFYLNFQLQPFLLPSFGLKPPLLTSPPYIPILSTNINVSMSNHKRVIENSKTRKGLSDFLKPPMSMHDMSDDELLWRASIVPKIQQPPFKHTPKVAFMFLTKGPVLLAPLWERFFKGNKGLFSIYVHSQPSFNGTVPQSSIFHGRRIPSKEVRWGENSMIEAERRLLANALLDFSNQRFVLLSESCIPLFNFSTIYTYLMNSTKTFVEAYDLLGLVGRGRYSPKMMPQVKLSQWRKGSQWFQIDRELAVEIVSDKLYYMVFKKYCNPDCYSDEHYLPTLVSIKFWKRNSNRTLTWVDWSRGGPHPSRYIRTDVTIDFLMYLRNGTTCEYNGHNINICHLFARKFTTHALDRLMRFAPKIMQFN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0972 414 Pfam Core-2/I-Branching enzyme 146 369 IPR003406 GO:0016020|GO:0016757
Lal10g0972 414 PANTHER CORE-2/I-BRANCHING ENZYME 5 413 - -
Lal10g0972 414 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 5 413 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0972 Lal-Chr10 17003005 17006546 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0972 10 17003005 17006546 Lal25g0462 25 3171017 3174986 ECH
Lal10g0972 10 17003005 17006546 Lal10g0972 10 17003005 17006546 ECH
Lal8g0437 8 2936695 2941188 Lal10g0972 10 17003005 17006546 LSH
Lal25g0462 25 3171017 3174986 Lal10g0972 10 17003005 17006546 LSH
Lal16g1003 16 6657327 6661856 Lal10g0972 10 17003005 17006546 PCT
Lal10g0972 10 17003005 17006546 Lal16g1003 16 6657327 6661856 PCT