Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0876 ATGGTTTCCTTAGAAGAAAAGATTAAAACTGGAGGAGTTGTTGGGGTTCAGACTCTAGCTGCTGATATGAAACTTTTGAAAGAAATGCAGGAACATTGTGGGGCTAGAAAGGCTTTAAATTCTGAGTTATGGCATGCTTGTGCAGGCCCTCTTGTATCTTTGCCTCAGGCAGGGAATCTTGTGTATTACTTTCCTCAGGGACATATTGAACAGGTGGCTGCTTCCACTAGAAAATCAGCAACCTCACAGATACCAAACTATCCCAATCTTCCTTCTCAGTTGCTGTGCCAAGTTCAAAATGTCACACTTCATGGAGACAAAGAAACTGATGAAATTTATGCTAAAATGAGTCTCCAACCACTGAATTCTGAAAATGATGTATTCCCTGTATCTGAGTTTGGGCTAAAGCATAGTAAACATCCCAGTGATTTTTTCTGCAAAACCTTGACTGCTAGTGACACAAGCACACATGGTGGCTTTTCGGTTCCACGGAAGTCAGCAGAAAAGCTCTTTCCTCCGTTGGATTACAAAATGCAGCCCCCAAGCCAAGAACTTGTTGTCCGAGATTTGCATGATGCTACCTGGACATTTCGCCATATATATCGTGGTGAGGATGCTTCTGGTGTTCAACTCTATTTATTGATTTGGGTCGGATTGGGTTCGAGCCTCACTCACTTGCATTCTTTACATTTTTATGTAGGTCAACCCAAGAGGCACCTTCTCACAACAGGATGGAGTGTATTTGTGGGCTCAAAAAGGCTTAGAGCTGGTGATTCTGTCATTTTTATCAGGGATGAGAAATCGCAATTGCGAATTGGTGTGAGGAGTGTTAATCGGCAACAGTCAACACTGCCATCATCAGTACTTTCCGCTGATAGCATGCACATTGGTGTGCTCGCTGCTGCAGCTCATGCTGCTGCTAATGGAAGTACATTCACTATTTTCTACAATCCGAGGGCATGCCCTTCAGAATTTGTTATTCCACTGGCTAAATACAGAAAAGCTGTATTTGGGACCCAGCTTTCAGTTGGCATGAGATTTGGTATGATGTTTGAGACAGAGGAATCGGGTAAGCGCAGATTCCTTAACAAGCAGGAAAAGCTGAGATATAATTCATGTTTCTGCAGATACATGGGCACAATAGTTGGTGTAAGTGACTTGGATCCTTTAAGGTGGCCTGGTTCTAAGTGGCGTAATGTTCAGGTGGACTGGGATGAGCCAGGTTGTGGAGATAAGCAGAATAGAGTTAGTGCATGGGAGATTGAGACTCCTGAAAGTCTTTTTATCTTTCCTTCTTTGACTTCAGGTTTAAAAAGGCCATCACAATCTGGATTTTTGGAAAATCAGTGGGGAAATTGGATAACAAGACCTTTTATAAGAGTTCCTGAAAATGGAACACATGAGCCCCCAAACTCAATATCAAATCTCTACTCAGAACACATGATGAAAATGCCTTTTAAATCTCAACTTGTTAACAACAATAGTGCATTTTTACGGGTCATGCAACAAGAATCTGCTGCTACAAAATGTCTCTTAGAGGTGAATACAACACTGGCACAAGATAGGCAAAAAGTACATCCTAGTTCAGAAAGCATACCACTGAAAAATCTACATTCTCAATCTATCCCTGACCATTATAATGCCTTAAACCTGCACTCAATTTCAAAAAGTGATCAACCTGATCAATGTCAGCCTCTTGCCAAAAATGATAATCATGAGTCGTCTGGAATAGTTACTGATAAGCCAAAATTAGAATCTGAGGTGTTATCCGATAACATTTTTGACATCCCTGCATATCCCACTATACCGCAAAATCTTGCTAGCCATATGACATTCCTCAATCAAAACCAGAGTCCATTGCTATCCCAATCCTGTGCATGGCCCATGCAACAACCTCAGTTAGAATCATCTACATCACATCTCCAACTGCTTGGTATGCCTCAATCTGATCCTACTATTGTTAATGGTATGCTTCCTCAACTAGACATCGATGAATTGATGATGTATTCTTCCTGCCAACCTTTATCTGATTTGCAAGAGCATACCGCGCTTCAAAATCCGGCAGTGAACGCCCCTTTACCTCCACTGAGCCAAGTGTGGGATCATCATGTCACGAACTTCAAGTTTTCATCTCAGGCAGATCAGCTAACATCTATGTGCCAGTCAGGGCTGTATGGCCTAAACGGCATATCTAGTTCAAACAATATGAAGGATCTTTCAGCCGAGAGCAACAACCGAAGTGATATTTGTGTCAATGTGGATGTTAGTAACAGTGTAAGTACCACCACTATGGTTGATCCTTCTACATCAAGTACCATTTTGGATGAGTTTTGCACATTGAAAGGCAGGGATTTTCAGAATCCACCAGATTTCACGGTGGGCAACTTAAGTTCCAGCCAGGATGTCCAGTCTCAGATAACCACAGCAAGCCTAGCAGAGTCACATGCCTTTAACTCTGGTGGTACATCATTGAGCCACATCGATTTTGATGACAGCAGCTTTCTGCAGAATAATTCATGGCAACAAGTAGCTCCACCTATGCGAACCTACACAAAGGTGCAAAAGGCAGGTTCTGTAGGAAGATCAATTGATGTCACCACATTCAAGAACTATGAGGAGCTGATCCTTGCAATAGAGTGCATGTTTGGATTGGGCGGTCTTCTGAATGACACCAGAGGTTCTGGATGGAAATTGGTATATGTAGATTATGAGAGCGATGTTTTACTTGTCGGAGATGATCCATGGGAGGAATTTGTGGGGTGCGTCCGATGCATAAGAATTCTATCACCTTCAGAAGTTCATCAGATGAGTGAAGAAGGGATGAAGCTTCTAAACAGTGGTGCCTTGCAAGGGATCAGTGGTTAG 2865 0.4241 MVSLEEKIKTGGVVGVQTLAADMKLLKEMQEHCGARKALNSELWHACAGPLVSLPQAGNLVYYFPQGHIEQVAASTRKSATSQIPNYPNLPSQLLCQVQNVTLHGDKETDEIYAKMSLQPLNSENDVFPVSEFGLKHSKHPSDFFCKTLTASDTSTHGGFSVPRKSAEKLFPPLDYKMQPPSQELVVRDLHDATWTFRHIYRGEDASGVQLYLLIWVGLGSSLTHLHSLHFYVGQPKRHLLTTGWSVFVGSKRLRAGDSVIFIRDEKSQLRIGVRSVNRQQSTLPSSVLSADSMHIGVLAAAAHAAANGSTFTIFYNPRACPSEFVIPLAKYRKAVFGTQLSVGMRFGMMFETEESGKRRFLNKQEKLRYNSCFCRYMGTIVGVSDLDPLRWPGSKWRNVQVDWDEPGCGDKQNRVSAWEIETPESLFIFPSLTSGLKRPSQSGFLENQWGNWITRPFIRVPENGTHEPPNSISNLYSEHMMKMPFKSQLVNNNSAFLRVMQQESAATKCLLEVNTTLAQDRQKVHPSSESIPLKNLHSQSIPDHYNALNLHSISKSDQPDQCQPLAKNDNHESSGIVTDKPKLESEVLSDNIFDIPAYPTIPQNLASHMTFLNQNQSPLLSQSCAWPMQQPQLESSTSHLQLLGMPQSDPTIVNGMLPQLDIDELMMYSSCQPLSDLQEHTALQNPAVNAPLPPLSQVWDHHVTNFKFSSQADQLTSMCQSGLYGLNGISSSNNMKDLSAESNNRSDICVNVDVSNSVSTTTMVDPSTSSTILDEFCTLKGRDFQNPPDFTVGNLSSSQDVQSQITTASLAESHAFNSGGTSLSHIDFDDSSFLQNNSWQQVAPPMRTYTKVQKAGSVGRSIDVTTFKNYEELILAIECMFGLGGLLNDTRGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVHQMSEEGMKLLNSGALQGISG 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0876 954 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 230 952 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lal10g0876 954 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 26 204 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lal10g0876 954 SUPERFAMILY CAD & PB1 domains 849 927 - -
Lal10g0876 954 MobiDBLite consensus disorder prediction 555 573 - -
Lal10g0876 954 Pfam Auxin response factor 302 361 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lal10g0876 954 Pfam AUX/IAA family 846 935 IPR033389 -
Lal10g0876 954 ProSiteProfiles B3 DNA-binding domain profile. 145 278 IPR003340 GO:0003677
Lal10g0876 954 PANTHER AUXIN RESPONSE FACTOR 5 230 952 - -
Lal10g0876 954 PANTHER AUXIN RESPONSE FACTOR 5 26 204 - -
Lal10g0876 954 MobiDBLite consensus disorder prediction 555 580 - -
Lal10g0876 954 SMART B3_2 145 278 IPR003340 GO:0003677
Lal10g0876 954 Gene3D - 844 937 - -
Lal10g0876 954 Gene3D - 340 428 - -
Lal10g0876 954 Gene3D - 143 277 IPR015300 -
Lal10g0876 954 CDD B3_DNA 144 276 IPR003340 GO:0003677
Lal10g0876 954 SUPERFAMILY DNA-binding pseudobarrel domain 135 305 IPR015300 -
Lal10g0876 954 ProSiteProfiles PB1 domain profile. 848 932 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0876 Lal-Chr10 16266844 16273837 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0876 10 16266844 16273837 Lal10g0876 10 16266844 16273837 ECH