Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0874 ATGATCAGTGTAGTTGATTCAATGGAAGGTGTTGATCAGAGAACTAGTTGTGCTGCATTTGGGTCATCCTCTGGGGCAGTTCCTAGACCACCAAACCGTTTGAATGCTCTCAATCAAATCGGAATTCCGCCTTCTCACCCGAATACTAATGTTTCGCCTTCGAGTTCAAACCCTTATTCCCAAATTATGGCCTCACAACCCCACAGATTGAGGTCTCTGAGTTTGAGCCCTGGGTCGGGGTCATCATCCCATTCTAGGTCTCTGTCTCAATCCTCATTTTTTTCTCTGGATTCCTTGCCCCCTTTGAGCCCTTCGCCCTATCAACCTTCGTCCGCAGCCACCTCATTTGTTGATTCGGTTTCGGCAAATGTGTCTATGGAGGAAAGATTGGGGAATGCAAATTCTGTGCCTGTTAACCGTGGTCGTTCTGTTCAGCTTGGCCATAGTCTTCCCCCTCGTAAGGGGCACAGGCGCTCGAGTAGTGACTCACCTTTAGGAATCACTGATTACATTCAGTCTGTTCCTCAGTTTGTTTCATCCGGTGCTTGGAATGATCATGACAACTCTGTTTCGAGAGGAGAAAGCTTGGGTTCGGAAAAGAAGCCAGTTCAGTTAGTGTTGAAGGTACCGAATAAGGATGTGGATCGTGTTGATGGTTTTACTGGAGAAAAGAGGAGTGTGAGGAAAGAGGATTCACTGGATGTCTTATGTAGTTCATACATGAATTTGGAGAACATTAACAATATGGGGTTTTCTATGGAAGACAAGGATGTGGATAGCAAAAATAGTGGTTCCAAGACAGTTGAAAGCAGTGACAACGAAGTTGAGAGTCATATAAATGGGAAGACAACCGGTGCTTGGGGGGCGAGCTCAAGCTGCTCGAAAGAACGAAAGGAAGGAGTGAAGAGGAGTTCGAATGGAGACATTGCACCCAGTGCCCGACACCGCAGAAGTTTCTCATTGGATAGTTCCATAGGAAATTTTCATATTGAAGATGGATCATCTAAGCTTCCTCCTTTGCAAAATCCAGTTGGTCAACACTCGCCTAGCAATTCAGTAGAGGGTAAAACATCTGAAACCACTGCGGAGTTTGGAAATGGCGAATTCAGCTCTGAGGAGCTAAAGAAAATACGGGAGAATGATAAGCTTGCTGAAATTGCCATAATTTTGGCTAACCGTCTATCTGCTGCACGTTCGAAAGAGCGGAAGACACGATACATTTCTGAATTGGAGCAGAAGGTGCAAACCCTTCAGGCAGAGACAACCACATTGTCTACTCAGTTTACCAAATTACAGATGGATACTGCAGAGCTTAAAAGTCAGAATAACGAGTACAAACTGAGGCTTCAAGCCATGGAACAACAGTCCAAACTGAAAGATGCTCTGAATGAGACTTTGGATGCTGAAGTTCGTCGTTTAAGGCGCACTGTTGCAGAACTTGGTGGCGAGTCCCTTCTCTCGAGTCGCATTGCTCAACAGCTTGCTATTAATCAACAAATGTTCCAGTTACAGCAGGCCAACCAGGTTAGACAGTTTCAACAGCAGAACAGCCATCCTCAGCAGGAGACACAGTCTCAATCGCAATCACAGCAGATTCAGCGTAACAATGAATTGCAATCCCAACGCCAGAATGGCAAAACTACCGCCTACTGA 1653 0.4561 MISVVDSMEGVDQRTSCAAFGSSSGAVPRPPNRLNALNQIGIPPSHPNTNVSPSSSNPYSQIMASQPHRLRSLSLSPGSGSSSHSRSLSQSSFFSLDSLPPLSPSPYQPSSAATSFVDSVSANVSMEERLGNANSVPVNRGRSVQLGHSLPPRKGHRRSSSDSPLGITDYIQSVPQFVSSGAWNDHDNSVSRGESLGSEKKPVQLVLKVPNKDVDRVDGFTGEKRSVRKEDSLDVLCSSYMNLENINNMGFSMEDKDVDSKNSGSKTVESSDNEVESHINGKTTGAWGASSSCSKERKEGVKRSSNGDIAPSARHRRSFSLDSSIGNFHIEDGSSKLPPLQNPVGQHSPSNSVEGKTSETTAEFGNGEFSSEELKKIRENDKLAEIAIILANRLSAARSKERKTRYISELEQKVQTLQAETTTLSTQFTKLQMDTAELKSQNNEYKLRLQAMEQQSKLKDALNETLDAEVRRLRRTVAELGGESLLSSRIAQQLAINQQMFQLQQANQVRQFQQQNSHPQQETQSQSQSQQIQRNNELQSQRQNGKTTAY 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0874 550 Coils Coil 435 455 - -
Lal10g0874 550 Coils Coil 463 483 - -
Lal10g0874 550 MobiDBLite consensus disorder prediction 131 166 - -
Lal10g0874 550 MobiDBLite consensus disorder prediction 18 87 - -
Lal10g0874 550 MobiDBLite consensus disorder prediction 255 363 - -
Lal10g0874 550 MobiDBLite consensus disorder prediction 38 87 - -
Lal10g0874 550 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 72 550 - -
Lal10g0874 550 PANTHER BZIP TRANSCRIPTION FACTOR 72 550 - -
Lal10g0874 550 MobiDBLite consensus disorder prediction 339 363 - -
Lal10g0874 550 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 392 445 IPR004827 GO:0003700|GO:0006355
Lal10g0874 550 Gene3D - 387 435 - -
Lal10g0874 550 SUPERFAMILY Leucine zipper domain 388 440 IPR046347 GO:0003700|GO:0006355
Lal10g0874 550 Coils Coil 400 427 - -
Lal10g0874 550 CDD bZIP_plant_RF2 389 436 IPR044759 GO:0003700|GO:0006355
Lal10g0874 550 MobiDBLite consensus disorder prediction 277 291 - -
Lal10g0874 550 SMART brlzneu 371 444 IPR004827 GO:0003700|GO:0006355
Lal10g0874 550 Pfam bZIP transcription factor 391 442 IPR004827 GO:0003700|GO:0006355
Lal10g0874 550 MobiDBLite consensus disorder prediction 510 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0874 Lal-Chr10 16256082 16260698 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal10g0874 bZIP_1 1.9e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0548 8 3784668 3788628 Lal10g0874 10 16256082 16260698 LSH
Lal25g0535 25 3864960 3873171 Lal10g0874 10 16256082 16260698 LSH