Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0873 ATGGATGGAGAAAATATGAGGATTGGGGCAAAGAAGAAGAAGAGATCGAAGGCGGTGGAAGTTGGTTTTGATTCGGATGATAATGAGACCATTGGCTCTATGTTTAAGCTAAGGAGGCCTAAGAAGAAGGTTAATTTGGTGTCAGAGGGGTCTTGTGGTGACCGAGGCAAGAATGGTAAGGCTGTTGTTGGGAAAGATTCAGTTGCTGATAACATGGATTTGGGGGGTATGGATGATACCTTGGCTAGTTTCAGGAAGAGGTTGAAGGGTCCAAAGAGAGATCGGGGATCTGAAGCCAGTAGAGGAAGAAGTTCTGCTTCGAACGTGGGTCTGGTGTCATATTCTGATAGATCTTTGAATGTTTCTGTTGAGGGAATTGAGGGTCATGAATTGTCTGGTGATGATTTCGTTGCTCAGGAATCAAGGGGCACCTCAAAGGATGAGAAAGTGGTAGATTTGTTGCTTGGTGATGGCACACAGCACTCTTCTGATGAAAAAATGGAAGACTCCTTGTCAGTGATAATCCGAAAGGCGCAATCTAACCTGATTAAGAAGTCACGGGCCTCTTCAAGTTCAAAGAAGAAAAAGGGGACTCAGAATGTGGATAATGACTTTAGACCTGGCTCTGAAAGTGTTCTTGAAACTGTAGATTATGTGGGTGTATGTAAATCTAGATCTGCTCCTGCCTCGGAATCGGGTAAAAGAGATCTGACATTTTCTTCCGTTTCTGATAAACAAAAGTACGGTGATGATTGTTTTCAAGAGGATACTGCTGAGGGCATTTGTGATATTCCAGATGAATCATTAGCTGATCACTCTCCCTCAACTAATGTCTGCAAAGGAGATAGGCAACAACTGTCTTGTGTGCAATCTGAAAATGTTTGTTTGAATCCGTGTTCTTCCAGGTTAGATGATGTTGAAATAATTCGTACTCTGCCTCTATCAAGAGCAGGGGAAGGGGCACATGAATGTACTGAGAGTGAGTTCAAGAATAGATTGAATGATGAACTAGCACAAGCGTGTAATGATGCTTCAAAACATGGTGTTTCTGCTTCTATGGAGAAAGAAAGTTCCTTATCTTCTCATGACACCGGATCCTTGATTAAATCGAGTGGAAGTATATTGATTGAGAATAATTTTACGGTTTCTGGAAACTTTTTCCAGGAATCCTCAGACAAAGAAGCTCTAAAGCTCTCTGGATTCCATGTGGAGGAAGATGGAGGTGTAAAATCTGAAACCGAGTTTATATCTGGTAGAAGTTTCTGTGATTATAGTAGTTCATATACAAAGGCTGAAGTGAAAGATTTTGATTTAGGTTCTTCACTTGAAAAAAATGATGTAATGGCTGGTGGTAGCTTATCTCCTATGATGTCTAATGAAGCCATTGAATCTGAATTGGCTAATGAGTTAAATCACCCAGAGAAACCTTCAGAAATGTGTAATATTCCAAAAGACTCTACTCCTTCAGTTCTGGAATGCTTAGATCCAGTTCAATCCGATGGATCCTCTCTTCCATCTGCAATTCCAGATGAAAATGAGAATTATGCAGAATTTCATGCCTCTCTGTCTGATTTTGCCAACAATGATGGTAAGATCTCAGTCCTTTCACGTGCCGTGCGAAAGCCCAAAATGCATAAGCATGGAGACATGACATATGAGGGGGATGCTGAATGGGAGATTTTAATAAATGATCAATCTCTTCATGAAAGCCAAGTTTTTGCAGATGGTGACCACACTCTTAGAACAAGGGCGAGGCTTGATTCCTCTTTTAGTGCTGTCTATGACTCTGAAAGTGTTGCAGTAGCAGCAGTATCAGCTGGATTAAAAGCCCATGCAGCTAGTCCAATTGAGAAAATAAAATTTAAGGATATTTTGAAGCGTAAAGGTGGTCTCAGGGAATACTTGGATTGCAGAAATAAGATCTTAAGTCTTTGGAGCAGAGATGTTACACGCATTTTGCCTCTTGCTGAATGTGGTGTTAGTGATACCCATTCTGATGATGAAAGCCCCCATTCTTTTCTCACTAGGGAGGTCTACGCATTTCTGGATCAATGTGGTTACATAAATGTTGGAATTGCCTCTCAGAAGGAGATTCTTGGAAATAGTGCAAGTGATTGCTGTAAACTTGTAGAAGAAAAAGGTCTTGAGGAAAGTTCCACACCTTTAGTGGCTGACTCTGAAGATGGAGTTTCCTTTATTGTTGGTCAGACTGAAATGTCAGATACTTCCATGGAGATTAACAAAAGTCTAACAACAGTGTATTACGAAGACCTGAAAACTGAAGCTGCAGAAGACAGACGGCATGTTAATGCAGCAACAATGGCTATATCAAATATGAGACAACATGAAGAAAGAAAAAATTATGAATACCGGGAAAATGGGCAAAGCAATGAATCCGCCTGCGTTAAATCTGCTGTAGGTGATCAGATAGGTGATCCTCTGCAGTCTGATTCAAAGGCTAGAAAGAGAGTGATTATCATTGGAGCTGGTCCTGCTGGGCTAACTGCTGCTCGTCATTTGAAACGTCAGGGATTTTCTGTAATTGTACTTGAGGCTAGGAGTAGGATAGGAGGTCGTGTATTTACAGATCGCTCATCTCTTTCTGTCCCAGTGGACCTTGGTGCTAGCATTATCACTGGTGTGGAGGCTGATGTGGCCACCGAGAGAAGACCAGATCCTTCCTCATTGGTTTGTGCTCAGTTGGGCCTTGAGTTGACAGTGCTAAACAGTGACTGTCCTCTTTACGATACAGTGACAGGACAAAAGGTTCTGGCAGATATGGATGAAGCACTTGAAGCTGAATACAATAGTCTTCTTGATGACATGGAATTGCTCGTTGCTCAGAAAGGTGAACAGGCGATGGGAATGTCTCTTGAAGATGGTTTAGAATATGCCCTTAAGATTCGCCGTATGGCACTCTCTGGAAGTATTGGAGAAACTGAAAAACATAATTCTGGTTATAGTCCATTTGATTCGAAAAGAGACTGTACTGTGAAAAAAAATATTGATGAGGAGATTTTGAGTCCTCTGGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTATGGCTGTGCTGCTTTGCTTACAGAAGTTTCTCTTCCCTACTGGAATCAAGATGATGTCTACGGAGGATTTGGGGGAGCTCATTGTATGATTAAAGGGGGTTACAGCACTGTTGTCGAGTCTTTAGGAGAAGGGCTTGCTGTCCACTTGAACCATGTCGTAACAAATGTGTCTTATGGCATCAATGAATCTTACCAGAATAATAAAGTCAAAGTTTCTACGTCAAATGGGAATGAATTCTTTGGAGATGCTGTCCTCATCACTCTTCCACTAGGCTGTTTGAAGGCTGAAACTATACAATTCTCTCCCCCTTTGCCCCCGTGGAAATATTCTTCTATTCAGCGTCTTGGCTTTGGTGTTCTCAATAAAGTCATTTTGGAATTTCCTTGTGTGTTTTGGGATGATGCCGTGGATTACTTTGGAGCAACATCTGAGGAAAGAGGCAAAAGAGGTCACTGCTTTATGTTTTGGAATGTTAGGAAAACAGTTGGGGCTCCTGTCCTTATAGCACTAGTGGTTGGTAAGGCAGCCATAGATGGTCAGAGTTTGAGCTCTTCTGATCATGTCAACCATGCATTGAAAGTTCTCCGTAAACTATTTGGGGAGGCTTCAGTACCTGATCCTGTTGGACATGTTGTGACTGATTGGGGTAGGGATCCTTTTAGCTATGGTGCTTATTCGTATGTTGCTATTGGAGCATCAGGAGAAGACTATGATATATTAGGGAGGCCAGTTGATAACTGCATGTTTTTTGCTGGTGAAGCGACCTGCAAAGAGCACCCTGATACAGTTGGTGGTGCAATGATGAGTGGACTACGGGAGGCTGTTCGCATAATTGATATATTGAGCACCGGAAATGATTACACTGCAGAGGTGGAAGCAATGGAAGTTGCTTCGAGACAGTTAGATACTGAAAATGAAGTAAGGGATATAACAAAGAGACTAAACGCAGTAGAGCTTTCTAACTTATTCTACAAGAACTCTTTGGATGGTGCTCAAATCTTAACCCGGGAAGCTTTACTAAGGGAAATGTTCCTTAATGCGAAAACCAATGCTGGGCGCTTGCATGTGGCCAAAGAATTGCTATGCCTTCCTGTTGGAAACTTGAAGTCCTTTGCTGGGAGTAAAGAGGGGCTAGCTGTTCTCAACTCATGGATACTGGATTCAATGGGGAAGGATGGTACCCAACTCTTGCGGCACTGTGTGCGTCTTCTTGTGCGTGTTTCAACTGATCTACTTGCTGTACGCTTGTCAGGAATAGGGAAAACAGTGAAGGAAAAAGTTTGTGTGCATGCTAGCCGTGATATTCGAGCTATAGCAAGCCAGTTGGTCAATGTATGGCTTGAAGTTTTCCGCAAGGGAAAAAAAGCTTTTAATGGCGGATTGAAGTTGTCAAGACAAGCAATTGCGTTAGATATATCAAAGAGAAAACATTTAAAAGATTCAGCCTCAGGAAAACCACCTCTGAGTACACATCCTGGTAGCCTTGATAATAGAGGAAGACAACAGTCAGCAATTGACTCAAGGCATGAGGTCAGTTCTTCCAGGTCCCAAGGTTCAATTAGCAAAGTACTCACCGAGAAGGAGGATAACTGCTATGTTATTTCTGAAGAAGAACAGGCTGCTATAGCTGCTGCAGAAGCTGCCCGTGCTAAAGCACATGCTGCTGCCGAGGCATATGCTGCTGCAGAAGCCAGGCGCAATAAGTTGTTACAGCTTCCAAAGATACCCTCATTCCAGAAATTCGCTTCAAAAAATGATGAGTGTGATAACAGAAAAAAGTGGTCTGGTGCTTTGGGAAGGCAAGATTGTATTTCAGAGATTGATTCGAGGAATTGCAGAGTTCGGGATTGGTCTGTTGATTTTTCTGCTGCTTGTGTTAACCTTGATAATTCTAGAATGCCACTTGATAACCTCTCACAGAGAAGTCACTCAAATGAGATTGCCAGCCATTTGAATTTCAGAGAGAACTCAGGAGAAAGTGTTGCTGTGGACAGCAGTATATATACAAAAGCTTGGATTGACACAGCTGGTGGTGTGGGAATAAAAGATTCTGATGCCATAGACAGATGGCAATCTCAAGCAGCTGCAGCCGATTCTTATTTTTCTAATCCAAGCATAAGTTTGAAGGATGAGGAGGATTCAAATGGGTGTTCAAGGTTACCCAGCTGGAAGCATGATGGTATGGCAAATGAAAGCTCAATTTCACAGGTTACTGTAAATAAGGAAACCTTGAAAAGTCATCACTCCCGTGGAGCAGATCTTATTAAACAGGCTGTTGTGGATTATGTTGGATCACTACTTATGCCCCTTTATAAAGCAAGGAAACTAGACAAGGATGGCTACAAGGCTATAATGAAGAAAAGTGCAACAAAGGTCATGGAGAAAGCCACAGATAAAGAAAAGGCCATGACTGTTGATGAGTTTCTAGATTTTAAGCGAAAGACTAAGATTCGCTCCTTTGTGGACACATTGATTGAGAGACACATGCCAATAAAACCAGATATGAAATCTTAA 5586 0.4205 MDGENMRIGAKKKKRSKAVEVGFDSDDNETIGSMFKLRRPKKKVNLVSEGSCGDRGKNGKAVVGKDSVADNMDLGGMDDTLASFRKRLKGPKRDRGSEASRGRSSASNVGLVSYSDRSLNVSVEGIEGHELSGDDFVAQESRGTSKDEKVVDLLLGDGTQHSSDEKMEDSLSVIIRKAQSNLIKKSRASSSSKKKKGTQNVDNDFRPGSESVLETVDYVGVCKSRSAPASESGKRDLTFSSVSDKQKYGDDCFQEDTAEGICDIPDESLADHSPSTNVCKGDRQQLSCVQSENVCLNPCSSRLDDVEIIRTLPLSRAGEGAHECTESEFKNRLNDELAQACNDASKHGVSASMEKESSLSSHDTGSLIKSSGSILIENNFTVSGNFFQESSDKEALKLSGFHVEEDGGVKSETEFISGRSFCDYSSSYTKAEVKDFDLGSSLEKNDVMAGGSLSPMMSNEAIESELANELNHPEKPSEMCNIPKDSTPSVLECLDPVQSDGSSLPSAIPDENENYAEFHASLSDFANNDGKISVLSRAVRKPKMHKHGDMTYEGDAEWEILINDQSLHESQVFADGDHTLRTRARLDSSFSAVYDSESVAVAAVSAGLKAHAASPIEKIKFKDILKRKGGLREYLDCRNKILSLWSRDVTRILPLAECGVSDTHSDDESPHSFLTREVYAFLDQCGYINVGIASQKEILGNSASDCCKLVEEKGLEESSTPLVADSEDGVSFIVGQTEMSDTSMEINKSLTTVYYEDLKTEAAEDRRHVNAATMAISNMRQHEERKNYEYRENGQSNESACVKSAVGDQIGDPLQSDSKARKRVIIIGAGPAGLTAARHLKRQGFSVIVLEARSRIGGRVFTDRSSLSVPVDLGASIITGVEADVATERRPDPSSLVCAQLGLELTVLNSDCPLYDTVTGQKVLADMDEALEAEYNSLLDDMELLVAQKGEQAMGMSLEDGLEYALKIRRMALSGSIGETEKHNSGYSPFDSKRDCTVKKNIDEEILSPLERRVMDWHFAHLEYGCAALLTEVSLPYWNQDDVYGGFGGAHCMIKGGYSTVVESLGEGLAVHLNHVVTNVSYGINESYQNNKVKVSTSNGNEFFGDAVLITLPLGCLKAETIQFSPPLPPWKYSSIQRLGFGVLNKVILEFPCVFWDDAVDYFGATSEERGKRGHCFMFWNVRKTVGAPVLIALVVGKAAIDGQSLSSSDHVNHALKVLRKLFGEASVPDPVGHVVTDWGRDPFSYGAYSYVAIGASGEDYDILGRPVDNCMFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILSTGNDYTAEVEAMEVASRQLDTENEVRDITKRLNAVELSNLFYKNSLDGAQILTREALLREMFLNAKTNAGRLHVAKELLCLPVGNLKSFAGSKEGLAVLNSWILDSMGKDGTQLLRHCVRLLVRVSTDLLAVRLSGIGKTVKEKVCVHASRDIRAIASQLVNVWLEVFRKGKKAFNGGLKLSRQAIALDISKRKHLKDSASGKPPLSTHPGSLDNRGRQQSAIDSRHEVSSSRSQGSISKVLTEKEDNCYVISEEEQAAIAAAEAARAKAHAAAEAYAAAEARRNKLLQLPKIPSFQKFASKNDECDNRKKWSGALGRQDCISEIDSRNCRVRDWSVDFSAACVNLDNSRMPLDNLSQRSHSNEIASHLNFRENSGESVAVDSSIYTKAWIDTAGGVGIKDSDAIDRWQSQAAAADSYFSNPSISLKDEEDSNGCSRLPSWKHDGMANESSISQVTVNKETLKSHHSRGADLIKQAVVDYVGSLLMPLYKARKLDKDGYKAIMKKSATKVMEKATDKEKAMTVDEFLDFKRKTKIRSFVDTLIERHMPIKPDMKS 1861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0873 1861 MobiDBLite consensus disorder prediction 84 100 - -
Lal10g0873 1861 MobiDBLite consensus disorder prediction 84 110 - -
Lal10g0873 1861 MobiDBLite consensus disorder prediction 1501 1543 - -
Lal10g0873 1861 SUPERFAMILY Homeodomain-like 598 694 IPR009057 -
Lal10g0873 1861 ProSiteProfiles SWIRM domain profile. 599 699 IPR007526 GO:0005515
Lal10g0873 1861 SUPERFAMILY FAD-linked reductases, C-terminal domain 1140 1251 - -
Lal10g0873 1861 Pfam SWIRM domain 609 689 IPR007526 GO:0005515
Lal10g0873 1861 MobiDBLite consensus disorder prediction 184 208 - -
Lal10g0873 1861 SUPERFAMILY FAD/NAD(P)-binding domain 821 1304 IPR036188 -
Lal10g0873 1861 Gene3D - 598 701 IPR036388 -
Lal10g0873 1861 PANTHER FLAVIN MONOAMINE OXIDASE 526 1857 - -
Lal10g0873 1861 Pfam Flavin containing amine oxidoreductase 832 1302 IPR002937 GO:0016491
Lal10g0873 1861 MobiDBLite consensus disorder prediction 1511 1543 - -
Lal10g0873 1861 Gene3D - 824 1300 IPR036188 -
Lal10g0873 1861 Coils Coil 1569 1589 - -
Lal10g0873 1861 Gene3D - 930 1257 - -
Lal10g0873 1861 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 526 1857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0873 Lal-Chr10 16232094 16244227 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Lal10g0873 Amino_oxidase 4.6e-105 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0873 10 16232094 16244227 Lal10g0873 10 16232094 16244227 ECH
Lal8g0550 8 3801699 3816648 Lal10g0873 10 16232094 16244227 LSH