Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0866 ATGGCCGCTGAAGAGGGACAAGTGATCGGTGTTCACAGTGTTGAAGCATGGAAGGAGCATATCGAGAAGGGAAACCAGAAATTGATTGTGGTGGATTTTACCGCTACTTGGTGTGGTCCTTGCCGCTTCATTGCCCCAATTTTTGCAGAGATTGCTAAAAAGACACCTGAAGTCATCTTCCTTAAGGTTGATGTGGATGAATTGAAGACTGTTGCTGAGGACTGGGGTGTTGAGGCCATGCCAACCTTCCTGTTCTTGAAAGAAGGCAAGGTTGTGGACAAGGTGGTGGGTGCTAAGAAGGAAGAGCTGCAACTTACAATAGTGAAGCATTCAACTGCTTCTTCTTCTTCTTGA 354 0.4633 MAAEEGQVIGVHSVEAWKEHIEKGNQKLIVVDFTATWCGPCRFIAPIFAEIAKKTPEVIFLKVDVDELKTVAEDWGVEAMPTFLFLKEGKVVDKVVGAKKEELQLTIVKHSTASSSS 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0866 117 PRINTS Thioredoxin family signature 29 37 - -
Lal10g0866 117 PRINTS Thioredoxin family signature 37 46 - -
Lal10g0866 117 PRINTS Thioredoxin family signature 76 87 - -
Lal10g0866 117 PIRSF Thioredoxin 7 112 IPR005746 GO:0015035
Lal10g0866 117 PANTHER THIOREDOXIN 3 115 - -
Lal10g0866 117 Gene3D Glutaredoxin 1 116 - -
Lal10g0866 117 PANTHER THIOREDOXIN H-TYPE-LIKE ISOFORM X1 3 115 - -
Lal10g0866 117 CDD TRX_family 15 102 - -
Lal10g0866 117 ProSitePatterns Thioredoxin family active site. 30 48 IPR017937 -
Lal10g0866 117 TIGRFAM thioredoxin: thioredoxin 15 106 IPR005746 GO:0015035
Lal10g0866 117 ProSiteProfiles Thioredoxin domain profile. 1 113 IPR013766 -
Lal10g0866 117 Pfam Thioredoxin 11 107 IPR013766 -
Lal10g0866 117 SUPERFAMILY Thioredoxin-like 5 110 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0866 Lal-Chr10 16175970 16178471 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0866 10 16175970 16178471 Lal10g0866 10 16175970 16178471 ECH
Lal8g0559 8 3876015 3878802 Lal10g0866 10 16175970 16178471 LSH