Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0865 ATGGAAAACAACTCAGTTTCCAAGCTTCTAACACTGTACTTCTTCACTGTCTTGTTTTTATGCTCTGAGTTCATCCATTGCAATGTTACCTATGATAAGAAGGCCATTGTTATCAATGGCCAAAGGAAAATCCTCATCTCTGGCTCCATTCACTATCCTAGAAGCACCCCTGAAATGTGGGAGGATCTAATTCAGAAAGCCAAAGATGGAGGCCTTGATGTCATTGACACATATGTTTTTTGGAATGTTCATGAACCTTCTCCTGGCAATTACAATTTTGAAGGAAGATATGATCTGGTACGGTTCATTAAAACAGTGCAAAAAGTGGGGCTCTATGTCCATCTTCGCACTGGACCTTATGTTTGTGCTGAGTGGAATTTTGGAGGATTTCCTGTTTGGTTGAAGTATGTTCCTGATATCAGCTTCAGAACTGATAATGGCCCTTTTAAGGAAGCAATGCAAGGTTTCACTCAGAAAATTGTCCAGATGATGAAAAATGAAAAGCTATTTGAATCTCAGGGTGGTCCAATTATTCTTTCTCAGATTGAGAATGAGTTACAAAGCAAGACTCGAGATGCTGCTGTTCGTTCATACATGAATTGGGCTGCAAAGATGGCTGTTGATTTGGGTACAGGAGTCCCCTGGGTGATGTGCAAGGAAGATAATGCTCCTGATCCGGTGATAAATTCTTGTAATGGTTTTTACTGTGATTTTTTCACTCCAAATAAACCATACAAGCCAACACTGTGGACTGAGGCTTGGACTGGCTGGTTTACAGAATTTGGTGGCACAATTGTCCAAAGACCAGTTGAAGATCTAGCATTCGGAGTTGCTCGTTTCGTACAAAAGGGTGGCTCATTGTTCAATTATTACATGTACCATGGTGGAACTAACTTTGGAAGATCATCTGGAGGCCCATTTATTATTACAAGTTATGACTATGATGCTCCAATTGATGAATATGGTTTGCTTAGGGAACCTAAATATACTCATCTTAAGGACCTTCATAAAGCCATCAAGCAATGTGAACATGCTTTGATTTCTGCAGATCCTAATGTTACATCATTAGGAACCTATAAGGAGGCTCATGTATTCTCTTCAGGAAATGGAACTTGTGCAGCTTTTCTGGCAAACTATGATTCAAATTCTTCTGCTAGAGTAACCTTCAATAACAGGCCCTATGACTTGCCTCCTTGGTCCATAAGCATCCTTCCTGATTGCGTAACAGATGTATTTAACACTGCAAGAGTGAGAGTTGGAACGTCACAAATACAAATGGTGCCTAGCAATTTGAAGATGTTGTCATGGGAGTCCTATAATGAAGATATATCGTCTCTAGATGAAAATTCGAAGATAACATCTTCGGGACTTATAGAACAGTTAAATGCTACCAGAGACACCAGTGACTATCTATGGTACACAACCAGTGTTGACATAAGTTCATCTGAATCGTTTCTCAAAGGAGGACAAAACAAGCCCAGCATTAGTATGAATTCTGCAGGCGATGGTGTCCATGTGTTTATCAATGGACAATTTTTAGGCTCAGCTTTTAGGACAAGTAAACAGAAAAGCTTCACATTTAACGGCCCTGCGAACTTACGTGCTGGAACGAATAAAATAGCACTTCTCAGCGTAGCTGTTGGATTACCGAATGTTGGGTTCCACTTTGAAACATGGAAGACAGGGATCACTGGTCCAATTTTGCTGAATGGTCTTGACCATGGACAGAAAGATTTGACAGAGCAGAAATGGTCATACCAGGTTGGCCTAAAAGGAGAAACTATGAAGTTGGTGTCTCCAAATGGAGTTTCATCTGTTGACTGGACCATAGAGCCACTAGCTACACAAAGCCAGCAACAATTGAAATGGCACAAGGCTTATTTCAATGCACCTGATGGAGTTGAACCATTAGCATTGGACTTGGGAAGTATGGGAAAGGGTCAAGTATGGATCAATGGACAAAGCATAGGAAGATATTGGATGGTTTATGCTAAGGGTGCTTGTAATTCTTGCAATTATGCTGGGACATTCAGATCTGCAAAGTGCCAACTTGGTTGTGGAAAACCCTCTCAACAATGGTATCATGTTCCAAGGTCCTGGTTAAAGCCAGAAAAGAACTTGATAGTAATTTTTGAGGAACTGGGAGGGAATCCTTCAAAAATATCTCTTGTAAAGAGAACAATACATACTGCAACTGCTAGTGAACCCAATTCAAAGAACTGA 2223 0.4053 MENNSVSKLLTLYFFTVLFLCSEFIHCNVTYDKKAIVINGQRKILISGSIHYPRSTPEMWEDLIQKAKDGGLDVIDTYVFWNVHEPSPGNYNFEGRYDLVRFIKTVQKVGLYVHLRTGPYVCAEWNFGGFPVWLKYVPDISFRTDNGPFKEAMQGFTQKIVQMMKNEKLFESQGGPIILSQIENELQSKTRDAAVRSYMNWAAKMAVDLGTGVPWVMCKEDNAPDPVINSCNGFYCDFFTPNKPYKPTLWTEAWTGWFTEFGGTIVQRPVEDLAFGVARFVQKGGSLFNYYMYHGGTNFGRSSGGPFIITSYDYDAPIDEYGLLREPKYTHLKDLHKAIKQCEHALISADPNVTSLGTYKEAHVFSSGNGTCAAFLANYDSNSSARVTFNNRPYDLPPWSISILPDCVTDVFNTARVRVGTSQIQMVPSNLKMLSWESYNEDISSLDENSKITSSGLIEQLNATRDTSDYLWYTTSVDISSSESFLKGGQNKPSISMNSAGDGVHVFINGQFLGSAFRTSKQKSFTFNGPANLRAGTNKIALLSVAVGLPNVGFHFETWKTGITGPILLNGLDHGQKDLTEQKWSYQVGLKGETMKLVSPNGVSSVDWTIEPLATQSQQQLKWHKAYFNAPDGVEPLALDLGSMGKGQVWINGQSIGRYWMVYAKGACNSCNYAGTFRSAKCQLGCGKPSQQWYHVPRSWLKPEKNLIVIFEELGGNPSKISLVKRTIHTATASEPNSKN 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0865 740 Gene3D Glycosidases 25 343 - -
Lal10g0865 740 Gene3D - 439 584 - -
Lal10g0865 740 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Lal10g0865 740 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Lal10g0865 740 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Lal10g0865 740 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Lal10g0865 740 PRINTS Glycosyl hydrolase family 35 signature 249 264 IPR001944 GO:0004553|GO:0005975
Lal10g0865 740 PRINTS Glycosyl hydrolase family 35 signature 286 301 IPR001944 GO:0004553|GO:0005975
Lal10g0865 740 PRINTS Glycosyl hydrolase family 35 signature 306 322 IPR001944 GO:0004553|GO:0005975
Lal10g0865 740 PRINTS Glycosyl hydrolase family 35 signature 619 633 IPR001944 GO:0004553|GO:0005975
Lal10g0865 740 PRINTS Glycosyl hydrolase family 35 signature 646 662 IPR001944 GO:0004553|GO:0005975
Lal10g0865 740 SUPERFAMILY Galactose-binding domain-like 583 730 IPR008979 -
Lal10g0865 740 PANTHER BETA-GALACTOSIDASE RELATED 3 733 IPR001944 GO:0004553|GO:0005975
Lal10g0865 740 SUPERFAMILY Galactose-binding domain-like 401 573 IPR008979 -
Lal10g0865 740 SUPERFAMILY (Trans)glycosidases 28 343 IPR017853 -
Lal10g0865 740 Pfam Beta-sandwich domain in beta galactosidase 346 417 IPR041392 -
Lal10g0865 740 Pfam Glycosyl hydrolases family 35 36 338 IPR031330 -
Lal10g0865 740 Gene3D - 598 733 - -
Lal10g0865 740 PANTHER BETA-GALACTOSIDASE 3 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0865 Lal-Chr10 16170899 16178471 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0865 10 16170899 16178471 Lal16g1841 16 17484882 17493581 ECH
Lal10g0865 10 16170899 16178471 Lal10g0865 10 16170899 16178471 ECH
Lal8g0560 8 3878317 3884049 Lal10g0865 10 16170899 16178471 LSH
Lal10g0865 10 16170899 16178471 Lal21g0137 21 945645 951327 PCT
Lal21g0137 21 945645 951327 Lal10g0865 10 16170899 16178471 PCT