Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0859 ATGGCCACATCTAGTGGAAACTCTTCTGTGTGCACAAAATTTCAGAGTTCTGGTTCTGAAGAGGATTTGAAGCTTCTAATGGATCAAAGAAAAAGGAAGAGAAAGCAATCAAATCGTGAATCAGCAAAGAGATCTAGGATGAGAAAGCAGAAGCACTTAGATGATGTTATTGCACAAGTGGACATGCTAAGAAAAGAAAACAGTGAAATTCTCACACGTGTGAGTATCATCACACAGCACTATCATAGAGTTGAGTCAGAAAATTGCATTTTGAGGGTCCAAATGGGAGAACTTAGCCAAAGACTACAATCATTGAATGATATTCTTGAACTTATCAACACAACTAATGGGATCTATGAAATGGATAATTGCTATGTTACAGGTGCAACAGATTATAATAATTTCATGAATCCCATGAACATGTTCTATCTTAATCAACCAATTATGGCTTCTGCAGACATGTTTTAG 468 0.3632 MATSSGNSSVCTKFQSSGSEEDLKLLMDQRKRKRKQSNRESAKRSRMRKQKHLDDVIAQVDMLRKENSEILTRVSIITQHYHRVESENCILRVQMGELSQRLQSLNDILELINTTNGIYEMDNCYVTGATDYNNFMNPMNMFYLNQPIMASADMF 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0859 155 MobiDBLite consensus disorder prediction 1 19 - -
Lal10g0859 155 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Lal10g0859 155 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 87 IPR004827 GO:0003700|GO:0006355
Lal10g0859 155 Pfam bZIP transcription factor 30 88 IPR004827 GO:0003700|GO:0006355
Lal10g0859 155 CDD bZIP_plant_GBF1 31 82 IPR045314 GO:0003700|GO:0006355
Lal10g0859 155 MobiDBLite consensus disorder prediction 1 52 - -
Lal10g0859 155 Gene3D - 28 81 - -
Lal10g0859 155 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 154 - -
Lal10g0859 155 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Lal10g0859 155 PANTHER BZIP TRANSCRIPTION FACTOR 1 154 - -
Lal10g0859 155 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0859 Lal-Chr10 16130682 16131149 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal10g0859 bZIP_1 1.4e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0859 10 16130682 16131149 Lal10g0859 10 16130682 16131149 ECH
Lal8g0565 8 3918153 3918623 Lal10g0859 10 16130682 16131149 LSH