Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0857 ATGGGTTCTCTGCAAGGACCAGCTATGTGCTCTTCTGTCCCTGCTAAACTAGCAGGTCTCTGCAGCCTTCCTATGATTGGACCAATGAATGTTAGGTTTATTAGAAGTCAGTTTTGGGGAATCAAGGAACTCAGTGGCAGCAAGGCTAAGCCGAGTGTACTTTCTTGCCGTGTAAACACGCGAAAGTGCAAGACGGTGCAATGCATTTTCAATTCACCCTCTAATGGAAGTGGAAGTATGGCAGGGAATTTTAATGAAAATGATGAAGATTATGTTAACTCTAGTGTGATTGAAGCTGTTGAGGTGAAAAGTGGAGCTGATGGTTTGATAATCAAAATGAGGGATGGAAGACACTTAAGATGCATCCATAACAATGCTCAGGAACGGCATCTTCCAGATTATGGACCACATCCTGCCATTGTATTGAAGATGGAAGATGGGACTGGTCTACTTCTCCCTATTATTGTTTCGGAGATGCCAAGCATTTTGCTAATGGCAGCAGTACGCAATGTTCGAATTGCTAGACCGACTTTATATCAAGTAGTGCAGGAGATGGTTGAAAAGATGGGTTATGAAGTTGGAAATGAGGCAGAATGTGTGAGCTTTGACCTTCGACCATCAGATGCTATCAATATTGCAGTAAGATGCAAGGTTCCAATACAAGTCAACAAGTACTTGGTATTCAGTGATGGAATGAAAGTAATTGAATCAGGGAAACTGTCAATGCAGTTCCCTAGTTTGGATGGACGATTATTTACTGAAATGGATCGGCCAACCGATCAGCCCAGTACTGAAACCGTTGAGTTCAATCTTTTGCACAACATGCTGAAAGCTGTTGTGGAAGAGCGCTATCAAGATGCTGGCTTTGAAGGATCCTCTGGTAATGAAGAGAGAAGAGAGCGGAAATCGGATTTTGAGAATTCAGAGGATGACCGGAGGACGAGAATTGGCAGCCTGAAAAAGAAAGCAATCAATGCATCCAGCAAATTCAGGCATTCTCTTAGGAAGAAAAGCAGCAGGAAAAAGAGTGTAAATCGAGGGAACTCCGTCTCCATTGAGGACATTCGAGATGTTAAGGAGCTCCAAGCAGTGGATGCATTTCGACAGGCACTTATGTTGGATAATTTGTTGTCGGCAAGACATGATGACTATCATATGTTATTGAGATTCTTGAAAGCGAGGAAATTTGATATTGAGAAAGCAAAGCAAATGTGGGCCAACATGATCCAATGGAGGAAAGACTATGGTACTGATACCATTATGGAGGATTTTGAGTTCAGTGAATTGAATGAAGTTCTGAAGTATTATCCACATGGTAATCATGGAGTGGACAAGGAAGGGAAACCTGTTTATATTGAGAGGTTAGGGAAAGTTGATCCCAATAAGCTTATGCAAGTAACTACCATGGATAGGTATTTGAGATACCATGTGCAGGGTTTTGAGAAAACATTTGCTGTTAAGTTTCCTGCATGTTCTATTGCTGCAAAGAGGCATATAGATTCAAGTACAACCATTTTGGATGTTCAAGGCGTGGGTTTCAAAAATTTTACCAAGTCTGCACGGGAACTTGTTATGCGGCTTCAGAAGATTGATGGTGACTACTATCCCGAAACATTATGCCGAATGTTTATAATCAATGCTGGTCCAGGTTTTAAGCTGCTCTGGAACACAGTGAGAACATTTCTTGACCCCAAAACCACTTCTAAAATAAGTGTTCTTGGAAACAAGTTCCAGAGTAAATTACTTGAGATTATCGATGTGAGCGAGCTGCCAGAATTTCTAGGTGGTACTTGCACTTGTATAGATGAAGGTGGTTGTATGAGGTCCGATAAAGGGCCCTGGCAAGACCCAGACATTTTGAAGATGGTTCTTAATGGTGAAGTACAGTGTTCCAGACAAATAGTAACAGTTTCTAACGAGGAGGGGACAGTGATCGAAAATGTGAAGACAAGTTATCCAATGATAAGAAGTAGTGATACATCTACAGCAGAATCAGGATCTGAAGTTGAAGATATCACTTCTCCCAAAGCAAATGGAAAATATATAAACCCTCGGTTGACTCCTGTCCATGAAGAAGCAAGATCAATTCGTAAGGTTAGCCATGTTGGCGGTTTCTCTGAGTACGATGAGTATGTTCCCATGGTTGACAAGACTGTTGATGTTGCATGGAAGGAGAATCAAGTGGCAGCTGAAAAGTCATCTGGTTCCACAGAAAAAATACTATTGACTACTGGAAGATCTCCTGATGGTCACTGTGCACATATCTGGGCTATTATAGTGGGCTTCTTTGTTGCCATGTTTACATTTGCTCGTTCAATAGCATTTCTTATTACTAAGAGAATAGGTGATTCTGAATCTGATGCTGCTCAAAATATCTCTAGCATGACTGTTGATTCCACATACAAGGAGGACTCTCGTCCCCCTTCATCTGCTTTGAAACGCCTTGGTGAACTTGAAGAGAAGGTTGACATGCTTCAGTCAAAACCTAATGTGATGCCATATGAGAAAGAAGAGCTGCTGAATGCTGCAGTTTATCGTGTTGATGCATTGGAAGCTGAGCTGATTGGTACAAAGAAGGCTTTATATGAAGCTTTGATAAGACAGGAAGAACTTCTGGCATACATCGACAGACGGGAAAGAATCAGATTTGAGAAAAAGAAGTTTTGCTGGTGA 2673 0.4149 MGSLQGPAMCSSVPAKLAGLCSLPMIGPMNVRFIRSQFWGIKELSGSKAKPSVLSCRVNTRKCKTVQCIFNSPSNGSGSMAGNFNENDEDYVNSSVIEAVEVKSGADGLIIKMRDGRHLRCIHNNAQERHLPDYGPHPAIVLKMEDGTGLLLPIIVSEMPSILLMAAVRNVRIARPTLYQVVQEMVEKMGYEVGNEAECVSFDLRPSDAINIAVRCKVPIQVNKYLVFSDGMKVIESGKLSMQFPSLDGRLFTEMDRPTDQPSTETVEFNLLHNMLKAVVEERYQDAGFEGSSGNEERRERKSDFENSEDDRRTRIGSLKKKAINASSKFRHSLRKKSSRKKSVNRGNSVSIEDIRDVKELQAVDAFRQALMLDNLLSARHDDYHMLLRFLKARKFDIEKAKQMWANMIQWRKDYGTDTIMEDFEFSELNEVLKYYPHGNHGVDKEGKPVYIERLGKVDPNKLMQVTTMDRYLRYHVQGFEKTFAVKFPACSIAAKRHIDSSTTILDVQGVGFKNFTKSARELVMRLQKIDGDYYPETLCRMFIINAGPGFKLLWNTVRTFLDPKTTSKISVLGNKFQSKLLEIIDVSELPEFLGGTCTCIDEGGCMRSDKGPWQDPDILKMVLNGEVQCSRQIVTVSNEEGTVIENVKTSYPMIRSSDTSTAESGSEVEDITSPKANGKYINPRLTPVHEEARSIRKVSHVGGFSEYDEYVPMVDKTVDVAWKENQVAAEKSSGSTEKILLTTGRSPDGHCAHIWAIIVGFFVAMFTFARSIAFLITKRIGDSESDAAQNISSMTVDSTYKEDSRPPSSALKRLGELEEKVDMLQSKPNVMPYEKEELLNAAVYRVDALEAELIGTKKALYEALIRQEELLAYIDRRERIRFEKKKFCW 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0857 890 CDD SEC14 426 597 IPR001251 -
Lal10g0857 890 Gene3D - 304 415 - -
Lal10g0857 890 Gene3D Bifunctional nuclease domain 123 193 IPR036104 GO:0004518
Lal10g0857 890 Gene3D Bifunctional nuclease domain 194 239 IPR036104 GO:0004518
Lal10g0857 890 SMART sec14_4 428 599 IPR001251 -
Lal10g0857 890 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 282 887 - -
Lal10g0857 890 Gene3D - 416 627 IPR036865 -
Lal10g0857 890 MobiDBLite consensus disorder prediction 287 348 - -
Lal10g0857 890 MobiDBLite consensus disorder prediction 325 343 - -
Lal10g0857 890 SUPERFAMILY CRAL/TRIO N-terminal domain 359 424 IPR036273 -
Lal10g0857 890 SUPERFAMILY CRAL/TRIO domain 428 622 IPR036865 -
Lal10g0857 890 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 428 602 IPR001251 -
Lal10g0857 890 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 282 887 - -
Lal10g0857 890 Pfam CRAL/TRIO domain 434 596 IPR001251 -
Lal10g0857 890 Pfam CRAL/TRIO, N-terminal domain 381 407 IPR011074 -
Lal10g0857 890 SMART CRAL_TRIO_N_2 383 408 IPR011074 -
Lal10g0857 890 MobiDBLite consensus disorder prediction 292 318 - -
Lal10g0857 890 SUPERFAMILY Hypothetical protein TM0160 121 237 IPR036104 GO:0004518
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0857 Lal-Chr10 16100610 16111877 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0857 10 16100610 16111877 Lal10g0857 10 16100610 16111877 ECH
Lal8g0567 8 3930870 3935148 Lal10g0857 10 16100610 16111877 LSH