Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0852 ATGTTCAGAAACCAATACGACACAGACGTGACCACATGGAGCCCCGCCGGGAGGCTCTTCCAGGTAGAGTACGCAATGGAGGCGGTGAAGCAGGGCTCCGCCGCAATCGGACTCCGATCCAAAACTCACGTGGTTCTCGCGTGCGTTAACAAAGCCAATTCCGAACTCTCTTCTCACCAGAAGAAAATCTTCAAGGTTGATGACCATATCGGCGTCGCCATCGCTGGACTCACCGCCGACGGCCGCGTCCTCAGTCGTTACATGCGGTCAGAATGCATTAACTATTCCTATACCTATGAGTCACCGCTTCCAGTGGGTCGACTCGTTGTTCAACTCGCTGATAAGGCTCAGGTTTGCACTCAGCGGTCTTGGAAACGACCTTATGGAGTTGGTCTCTTGGTAGCTGGATTAGATGAATCGGGAGCTCACCTCTATTACAACTGTCCAAGCGGAAACTATTTCGAATATCAGGCCTTTGCAATCGGTTCTCGCTCACAAGCTGCAAAGACATATTTGGAACGCAAGTTTGATAACTTCAATGGCTCCTCAAGAGAAGATCTGATCAAAGATGCACTTATTGCAACAAGGGAATCCTTGCAAGGTGAAAAACTCAGAAGTTCCGTATGCACTGTTGCTGTAGTTGGAGTTGGTGAGCCATTCCACATTTTGGATCAAGAAACTGTTCAAAAATTTATTGATGAGTTTGAGATTGTGAGGGAGGAAGAAGTTCCTCCGGCTGAAGAACCCCAGCCAGAAGCTGAGCAGGGTGCTGCCGCAGATCAGGGTGCCGGTGCAGCAGATCAAGGTGGTGCTACAAGTGAAGGTGCTGCTCCAATGGACATTTGA 846 0.4965 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFDNFNGSSREDLIKDALIATRESLQGEKLRSSVCTVAVVGVGEPFHILDQETVQKFIDEFEIVREEEVPPAEEPQPEAEQGAAADQGAGAADQGGATSEGAAPMDI 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0852 281 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 1 265 - -
Lal10g0852 281 Pfam Proteasome subunit 29 214 IPR001353 GO:0005839|GO:0051603
Lal10g0852 281 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 235 IPR029055 -
Lal10g0852 281 Pfam Proteasome subunit A N-terminal signature 6 28 IPR000426 GO:0006511|GO:0019773
Lal10g0852 281 ProSiteProfiles Proteasome alpha-type subunit profile. 21 232 IPR023332 -
Lal10g0852 281 MobiDBLite consensus disorder prediction 240 281 - -
Lal10g0852 281 PANTHER PROTEASOME SUBUNIT ALPHA TYPE 1 265 - -
Lal10g0852 281 SMART Proteasome_A_N_2 6 28 IPR000426 GO:0006511|GO:0019773
Lal10g0852 281 ProSitePatterns Proteasome alpha-type subunits signature. 6 28 IPR000426 GO:0006511|GO:0019773
Lal10g0852 281 CDD proteasome_alpha_type_1 6 215 IPR035144 GO:0019773
Lal10g0852 281 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 232 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0852 Lal-Chr10 16074324 16078852 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0852 10 16074324 16078852 Lal10g0852 10 16074324 16078852 ECH
Lal25g0548 25 3990310 3997656 Lal10g0852 10 16074324 16078852 LSH