Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0845 ATGGCATCGAGTTTTGATAGATGGGAAAAAGATCCCTTTTTTATCGCTGCCGAAGAAGTTCAGGAATCTGCAGACAGGATGGAATCTGCATATAGGACATGGATTCATGCAACAAGAGATTCCTCGTGCATGTGGAACTCTGACGAATTCCGCAGAGATCTACATACTGCCCTTGGTACTACTAAATGGCAGTTAGAGGAATTTAAACGGGCTTCCGGGTCAAGTTATAGCAAAACCTTGAGCGAGGGTGAAAGTCCAAGAAGCAGGCACCAAGATTTTATTGCTGCCATTGAGCACAAGGTCACAAAAGTTGACAAATTTTTAAATGAATCCGTCCATTCGGCTGGTAAGGCATCTCTGCCTTGGGTGCGTCTGGACGAAGGAGAACAAAATGAGCTTGCTTTGTTTCTTTCAGGAATGCCAGCAGCTGAAAGCAGCAACCCCACTGTATCTAACAGCAGGGACAGTGAAAATCCTCAATTAAGTGATAAAGATTATGCCAGTAATTCAAGGAATTTTCATGTTTCGTCTGGGTGGGGTGAAGCAATGGTGGAGACATCACATGGTCATCGTAGGGCAGCTAGTGCTAGTCCTGATATTGGTTCTTGGAAAATTGCAGTTTCTGATGATGCGCAGCAATCTAGTTCCTCCAGTGGTTCTCATGGTCCTATGCATAAGATACCCAGTTTATCAGCATTTCTTAGTTCCGTGGAACCTGTTAAGTTAAAGTGGCCTAGAAATGGTTATAAAAAGCTGAAAGCAGTGGATCATCATAAAGAAACTGATAGTGCATTACTACCTACGGTTGAATTGAATAGGGGCATCAGTGCAAGCAACGAAAGAAGTAAAACTAAACTTGATGGTTGGGATGAATGCTATGACAAGCAAATGCATGGATGGCATGGTGCTATTCAGAGACAGCTTCAAAGATCTCAGTACCAATTGCAATACAGTCAGCCTGTTCGAACAACTGTTCTGATCGTTATTCTTTGCTTGATCGTTCACAGCTGGCAGGAGCATGAAGGACAGACAAGGTTTTGGAACAAGTTCATATACCCTACATTGTCACTTAAGCAAGAGAGACAGTCCAGCATGTACAAAATTCAATGA 1110 0.4288 MASSFDRWEKDPFFIAAEEVQESADRMESAYRTWIHATRDSSCMWNSDEFRRDLHTALGTTKWQLEEFKRASGSSYSKTLSEGESPRSRHQDFIAAIEHKVTKVDKFLNESVHSAGKASLPWVRLDEGEQNELALFLSGMPAAESSNPTVSNSRDSENPQLSDKDYASNSRNFHVSSGWGEAMVETSHGHRRAASASPDIGSWKIAVSDDAQQSSSSSGSHGPMHKIPSLSAFLSSVEPVKLKWPRNGYKKLKAVDHHKETDSALLPTVELNRGISASNERSKTKLDGWDECYDKQMHGWHGAIQRQLQRSQYQLQYSQPVRTTVLIVILCLIVHSWQEHEGQTRFWNKFIYPTLSLKQERQSSMYKIQ 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0845 369 Gene3D - 9 112 - -
Lal10g0845 369 SUPERFAMILY t-snare proteins 10 110 IPR010989 GO:0016020|GO:0016192
Lal10g0845 369 PANTHER OS05G0443700 PROTEIN 1 333 - -
Lal10g0845 369 PANTHER EXPRESSED PROTEIN 1 333 - -
Lal10g0845 369 MobiDBLite consensus disorder prediction 143 169 - -
Lal10g0845 369 Pfam Syntaxin 6, N-terminal 11 104 IPR015260 GO:0016020|GO:0048193
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0845 Lal-Chr10 16021562 16024479 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0845 10 16021562 16024479 Lal10g0845 10 16021562 16024479 ECH
Lal10g0845 10 16021562 16024479 Lal21g0228 21 1509699 1512216 PCT
Lal10g0845 10 16021562 16024479 Lal4g0143 4 882364 885924 PCT
Lal21g0228 21 1509699 1512216 Lal10g0845 10 16021562 16024479 PCT
Lal4g0143 4 882364 885924 Lal10g0845 10 16021562 16024479 PCT