Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0841 ATGTCCGACAAAGAAAACCGCGTACTTCCCCATCGCAATGCAAAACAGAGAGCCGCAACTGCTATTACCGGAACAGCCAAGAAAAAGCGCGTCGCGTTAGGCGCAATCTCTAACCTACCACCGGAGAAACCCGTTTCCGGTAACGACACCACCAAGAAGAGAAAGCGTGTCCCATTAAGCGAACTCACTAACCTCCCACCGGAGAAATCGGTTCCCGGTTCAGACACCGAGAACAACCGAGTCAGAAAAAAACCCACAAAATCAAAACCCGCAACCGAGTTCGATAATAATAACTCGGATCCTCGGTTATGTGCACCGTATGTTTCTGATATATACGAGTATCTTCGGAAAATGGAGGTTGATCCAAGTAAAAGACCGTTAGCGGATTATGTACAAAAAGTTCAGAGTGATGTGAATGCGAACATGAGGGGTGTTTTGGTGGATTGGTTGGTGGAAGTTGCTGAAGAATATAACCTTGTTTCAGATACTCTTTATTTTTCTGTTTCATATATAGATAGGTTTTTGTCTCTCAATGCTTTATCCAGACAGAATATGCAGTTACTTGGTGTTTCTTCCATGCTCCTTGCATCAAAATATGAGGAAATTAAGCCTCCAGAAGTCGAAGATTTTTGTTACATTACTGACAACACATACAAGAAAGAAGAGGTTGTGGAGATGGAAGCTGATATATTGAAGACCTTGAAATTTGAATTGGGTGGACCTACAACTTCTAATCTGCAGTTTGAGTTCCTCTGTTACTACTTAGCTGAGCTCAGTTTGTTGGATTATAATTGTATAAAATTCTTGCCTTCTTTGGTGGCTGCATCTGTTGTATTTCTAGCCAGATTTATGTTAAGCCCAATGACACATCCTTGGAACTCGGCGCTTTATCAACTCACCAGATATGAGCCTGCTGACTTGAAGGAATGTATTCTAAACATACATGACTTGTACTTTAGTAGGAGAGGGGCCTCTTTAAAAGCTGTGAGAGAGAAATACAAGCAACATAAGTTCAAATGCGTGGCATTGACACCCTCGCCTCCTGAGATCCCTCTTTATTTTTTTGAGTTCAGAGTGGCAGATCCTTAG 1089 0.4206 MSDKENRVLPHRNAKQRAATAITGTAKKKRVALGAISNLPPEKPVSGNDTTKKRKRVPLSELTNLPPEKSVPGSDTENNRVRKKPTKSKPATEFDNNNSDPRLCAPYVSDIYEYLRKMEVDPSKRPLADYVQKVQSDVNANMRGVLVDWLVEVAEEYNLVSDTLYFSVSYIDRFLSLNALSRQNMQLLGVSSMLLASKYEEIKPPEVEDFCYITDNTYKKEEVVEMEADILKTLKFELGGPTTSNLQFEFLCYYLAELSLLDYNCIKFLPSLVAASVVFLARFMLSPMTHPWNSALYQLTRYEPADLKECILNIHDLYFSRRGASLKAVREKYKQHKFKCVALTPSPPEIPLYFFEFRVADP 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0841 362 MobiDBLite consensus disorder prediction 1 99 - -
Lal10g0841 362 Pfam Cyclin, N-terminal domain 110 238 IPR006671 -
Lal10g0841 362 PIRSF Cyclin_A_B_D_E 1 351 IPR039361 -
Lal10g0841 362 Pfam Cyclin, C-terminal domain 245 346 IPR004367 -
Lal10g0841 362 SMART Cyclin_C_2 167 347 IPR004367 -
Lal10g0841 362 Gene3D - 126 239 - -
Lal10g0841 362 SUPERFAMILY Cyclin-like 99 238 IPR036915 -
Lal10g0841 362 CDD CYCLIN 249 315 IPR013763 -
Lal10g0841 362 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 41 358 - -
Lal10g0841 362 CDD CYCLIN 142 231 IPR013763 -
Lal10g0841 362 Gene3D - 110 342 - -
Lal10g0841 362 SUPERFAMILY Cyclin-like 245 349 IPR036915 -
Lal10g0841 362 SMART cyclin_7 233 316 IPR013763 -
Lal10g0841 362 SMART cyclin_7 148 232 IPR013763 -
Lal10g0841 362 MobiDBLite consensus disorder prediction 75 90 - -
Lal10g0841 362 PANTHER CYCLINS 41 358 IPR039361 -
Lal10g0841 362 ProSitePatterns Cyclins signature. 143 174 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0841 Lal-Chr10 15996194 16000132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0841 3 356 Core Cell Cycle Gene Families AT5G43080 53.243 9.69e-135 386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0841 10 15996194 16000132 Lal10g0841 10 15996194 16000132 ECH
Lal10g0841 10 15996194 16000132 Lal17g0117 17 719787 721874 PCT
Lal17g0117 17 719787 721874 Lal10g0841 10 15996194 16000132 PCT