Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0835 ATGGGAGGTTGGGCTATTGCCGTGCATGGTGGTGCTGGTGTTGACCCTAATCTCCCTCTTCAGCGTCAGGAAGAAGCGAAACAACTCCTCACGCGCTGTCTCAATCTTGGTATCTCTGCTCTTCGTTCTAATGCCTCTGCCATCGATGTTGTCGAACTTGTGGTGAGGGAATTGGAAACAGATCCATTGTTCAACTCAGGGCGTGGATCTGCCCTGACGGAAAAGGGAACTGTGGAAATGGAGGCTAGCATCATGGATGGACCCAAAAGACGATGCGGTGCGGTTTCTGGTCTCACCACCGTGAAAAATCCGATCTCATTGGCCCGTTTAGTCATGGATAAGTCACCGCATTCTTACCTTGCTTTTGACGGCGCTGAACAATTCGCCAGGCAACAGGGTGTGGAACTTGTGGACAACGATTACTTCATCACTCCAGAAAATGTTGGAATGCTCAAGCTGGCAAAGGAAGCAAATGCAATTCTGTTTGATTACAGAATTCCAACAGTGGGGTACGAAACATGCGGTGCAGGTGTTGAGAGTCCACTGCTAATGAATGGACTTCCAATCAGCGTATACGCGCCCGAGACGGTAGGCTGCGTCGTCGTCGACGGTGAAGGAAGGTGTGCCGCCGCCACATCAACCGGTGGTTTAATGAACAAAATGACCGGTCGTATCGGTGACTCACCACTCATAGGTTCTGGCACCTACGCGTGTAACATTTGTGGGGTCTCATGCACTGGTGAAGGTGAAGCAATCATACGTGGCACACTGGCGCGTGAGGTGGCGGCTGTTATGGAATACAAGGGTTTGTGTCTTCAAGAAGCAGTGGATTTTGTTATTAAGCATCGTTTAGATGAAGGGAAAGCTGGGCTTATTGCAGTGTCCAACACTGGTGAAGTGGCTTGTGGGTTTAATTCTAATGGCATGTTTAGGGGTTGTGCCACTGAGGATGGGTTCATGGAGGTTGGAATCTGGGATCAGTAG 984 0.5 MGGWAIAVHGGAGVDPNLPLQRQEEAKQLLTRCLNLGISALRSNASAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFDGAEQFARQQGVELVDNDYFITPENVGMLKLAKEANAILFDYRIPTVGYETCGAGVESPLLMNGLPISVYAPETVGCVVVDGEGRCAAATSTGGLMNKMTGRIGDSPLIGSGTYACNICGVSCTGEGEAIIRGTLAREVAAVMEYKGLCLQEAVDFVIKHRLDEGKAGLIAVSNTGEVACGFNSNGMFRGCATEDGFMEVGIWDQ 327
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0835 327 CDD Asparaginase_2 5 318 - -
Lal10g0835 327 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
Lal10g0835 327 Gene3D (Glycosyl)asparaginase 196 327 - -
Lal10g0835 327 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 326 - -
Lal10g0835 327 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Lal10g0835 327 PANTHER L-ASPARAGINASE 1 326 IPR000246 GO:0016787
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal10g0835 Lal-Chr10 15966627 15969300 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0835 6 260 Miscellaneous Gene Families AT4G00590 29.496 8.18e-19 84.7
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0835 10 15966627 15969300 Lal10g0835 10 15966627 15969300 ECH
Lal10g0835 10 15966627 15969300 Lal21g0218 21 1447036 1449179 PCT
Lal10g0835 10 15966627 15969300 Lal4g0133 4 839206 840738 PCT
Lal21g0218 21 1447036 1449179 Lal10g0835 10 15966627 15969300 PCT
Lal4g0133 4 839206 840738 Lal10g0835 10 15966627 15969300 PCT