Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0826 ATGATGGACTCTTTTGTTGTTCTTAATTTTGTGAACAGTACATTGGATTGGGTGAAATTGGCTTTAGATGCTCCTTCTGCGCGAGCTGTAGTTTTTGGATTTCATATCGGTGGACATTTATTTGTGGAAGTTCTTCTTCTGGTGGTCATCCTTTTCTTGCTTTCCCAGAAAAGTTACAAGCCTCCTAAACGGCCTTTAACAAACAAGGAAATAGATGAGCTATGTGATGAATGGGTTCCAGAACCCCTTATTCCTTCTCTTAATGAAGAGATGCAATATGAACCACCGGTGCTGGAGAGTGCCGCTGAGCCACATACCATAATTGGTGGTAAAGAAGTTGTCAACTTTGCTTCAGCAAACTATCTTGGGTTGATAGGTCATCAAAAGTTACTTGACTCATGTTCTTCTGCTTTAGAGAAATACGGTGTTGGTTCTTGTGGTCCCCGAGGGTTTTATGGCACAATTGATGTACATCTTGACTGTGAAGCAAGAATAGCAAAGTTTTTGGGAACCCCTGATTCAATTCTATACTCTTACGGACTTTCCACCATGTTCAGTGCAATTCCTGCATTCTCTAAAAAAGGAGATATAATTGTAGTGGATGAGGGAGTCCACTGGGGAATACAGAATGGCCTTTATCTTTCAAGAAGCACTGTGGTGTATTTTAAGCACAATGACATGGACTCTTTACGAAATACTCTAGAGAACATTACTTCCAAAAATAAGCGGATCAAGAAGTTGAGGCGTTATATTGTTGTTGAAGCTGTCTACCAGAATTCTGGACAAATAGCACCCTTAGATGATATCATTAAGTTGAAGGAAAAGTACCGTTTTCGTGTTTTGCTGGACGAGAGCAACTCATTTGGTGTGCTTGGAATTTCTGGAAGAGGCCTCACTGAACACTATGGCGTTCCAGCTGAGAAATTAGACATTATAACTGCTGCTATGGGACATGCATTGGCCTCAGAAGGAGGATTCTGCACTGGAAGTGCTAGAGTTATAGATCACCAACGATTGAGCAGTTCTGGCTACGTCTTTTCTGCTTCTCTGCCTCCATATCTTGCTAGCGCGGCAATTACAGCTATTGACATCCTGGAGGAAAATCCCTATCTGATAACAAAGCTGAAGAACAACATTGCTGCATTATGGAGAGGATTATCGAACATAACAGGCTTCACAATTGCAAGTAATCCAGAATCACCAATTGTTTATTTGAGATTAGAGAAGTCAACGGGTACCTCGAAAGACGACTTACGTCTGCTAGAAAACATTGCTGAGCGTGTTTTGAAAGAAGATTCTGTATTTGTTGTGCCTTCAAAAAGATCAACATTGGACAAATGCCGCCTACCTTTAGGAATTAGATTGTTTGTTTCTGCAGGGCATTCAGAGTCTGATCTTCACAAGGCATCTGAATCATTGAAAAGGGTTGCAGCATTAGTCCTTGGTGGTCAATAA 1455 0.411 MMDSFVVLNFVNSTLDWVKLALDAPSARAVVFGFHIGGHLFVEVLLLVVILFLLSQKSYKPPKRPLTNKEIDELCDEWVPEPLIPSLNEEMQYEPPVLESAAEPHTIIGGKEVVNFASANYLGLIGHQKLLDSCSSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVVDEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLENITSKNKRIKKLRRYIVVEAVYQNSGQIAPLDDIIKLKEKYRFRVLLDESNSFGVLGISGRGLTEHYGVPAEKLDIITAAMGHALASEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAITAIDILEENPYLITKLKNNIAALWRGLSNITGFTIASNPESPIVYLRLEKSTGTSKDDLRLLENIAERVLKEDSVFVVPSKRSTLDKCRLPLGIRLFVSAGHSESDLHKASESLKRVAALVLGGQ 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0826 484 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 6 483 - -
Lal10g0826 484 Pfam Aminotransferase class I and II 112 473 IPR004839 GO:0009058|GO:0030170
Lal10g0826 484 Gene3D - 127 368 IPR015421 GO:0003824
Lal10g0826 484 Gene3D Aspartate Aminotransferase, domain 1 106 471 IPR015422 GO:0003824
Lal10g0826 484 Coils Coil 227 247 - -
Lal10g0826 484 SUPERFAMILY PLP-dependent transferases 86 477 IPR015424 -
Lal10g0826 484 PANTHER LONG CHAIN BASE BIOSYNTHESIS PROTEIN 1-LIKE 6 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0826 Lal-Chr10 15896309 15903778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0826 7 337 Acyl Lipid Metabolism Gene Families AT4G36480 77.644 0.0 554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0646 8 4545918 4553511 Lal10g0826 10 15896309 15903778 LSH
Lal25g0596 25 4495616 4503725 Lal10g0826 10 15896309 15903778 LSH