Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0823 ATGAATCCCCTCACACTTCTTCTCCACAATGCTAATGCAATTCACTTCCCCTTACACCCACACCCACACTCTTTTCTTTCTTCTCTCTCCCTTACCAATCCCAAACTTTCATTCCAAAAACATCACCACCAACATATCCCATGTTTTTCAATCAAAGCTTGTTCCTCATCAATTGAAATCGACATGGTTCAAAACTCTCAAGGCATCTACGCTCCAAAACACAACAACAAAGTTGTTGTTCTATGGGACCTTGACAACAAACCTCCACGTGGCCCTCCTTACTCCGCCGCCGTCTCACTTAAAACCACCGCCTCCTACTTCGGCGAAATTGTTGATATCTCCGCCTACGCCAACCGCCACGCTTTTATCCACCTTCCTCATTGGGTCATACAACAACGGCGAAACCGTAAACAACTCGATATCATGGAACGCAAAGGTGTTGTTACTCCCACTGACCCTTACGTTTGTAGCGTGTGTGGTCGCAAGTGTAAGACTAACTTGGACCTCAAGAAACATTTTAAGCAGCTTCATGAGCGAGAGAGGCAGAAGAAGCTTAGTCGAATGCGATCGCTTAAGGGGAAGAAACGGCAACGGTATAAGGAGAGGTTTATTTCTGGGAATCATAAGTATAATGAGGCTGCTAGGTCCTTGCTTAAGCCTAAGGTGGGTTATGGGCTTGCTTCTGAGTTGCGGCGAGCTGGGGTTTTTGTGAAGACTGTGGAGGATAAGCCTCAGGCAGCAGATTGGGCATTGAAGAAGCAGATGCAACATTCAATGAGTAGAGGGATTGATTGGTTGGTTTTGGTTTCTGATGATTCTGATTTTTCGGATATGTTGAAGAGGGCAAGGGAGGCGAGTTTGGGGACTGTGGTTGTTGGGGATTGGGATAGGGCGTTAGGGAGGCATGCTGATTTGTGGGTTCCTTGGATTGATGTTGAGAATGGAAATGTTTCGGAGATGGATTTGATGCCCAAGAAAAGGGACAGGAGGAGGAGTGAGGGGTTTGTGGAAGAGGATGGGTTGTTTACTGTGTCAAATTTTGATGGAGATGTTGATGGAGTGGAGAATTTGGATGGGGTAATGGATGAGTTTGTCGGAATGAGGACCAAGTTCAATGATTTGATCATTGTAGATGATGATGAAGAATGGGAAGAACAAGAAGATTACATGTCAGAGAGTAGCGACGATGAATACACAGAAGAAGATGAGGATGGATTTTATTGA 1224 0.4526 MNPLTLLLHNANAIHFPLHPHPHSFLSSLSLTNPKLSFQKHHHQHIPCFSIKACSSSIEIDMVQNSQGIYAPKHNNKVVVLWDLDNKPPRGPPYSAAVSLKTTASYFGEIVDISAYANRHAFIHLPHWVIQQRRNRKQLDIMERKGVVTPTDPYVCSVCGRKCKTNLDLKKHFKQLHERERQKKLSRMRSLKGKKRQRYKERFISGNHKYNEAARSLLKPKVGYGLASELRRAGVFVKTVEDKPQAADWALKKQMQHSMSRGIDWLVLVSDDSDFSDMLKRAREASLGTVVVGDWDRALGRHADLWVPWIDVENGNVSEMDLMPKKRDRRRSEGFVEEDGLFTVSNFDGDVDGVENLDGVMDEFVGMRTKFNDLIIVDDDEEWEEQEDYMSESSDDEYTEEDEDGFY 407
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0823 407 PANTHER OS06G0166200 PROTEIN 39 368 - -
Lal10g0823 407 ProSitePatterns Zinc finger C2H2 type domain signature. 156 177 IPR013087 -
Lal10g0823 407 PANTHER - 39 368 - -
Lal10g0823 407 ProSiteProfiles Zinc finger C2H2 type domain profile. 154 182 IPR013087 -
Lal10g0823 407 Gene3D - 70 311 - -
Lal10g0823 407 CDD PIN_LabA-like 164 294 - -
Lal10g0823 407 SMART c2h2final6 154 177 IPR013087 -
Lal10g0823 407 MobiDBLite consensus disorder prediction 379 407 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal10g0823 Lal-Chr10 15883311 15886984 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0823 18 345 C2H2 Transcription Factor Family AT5G52010 67.647 3.48e-165 467
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal10g0823 None None None
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0823 10 15883311 15886984 Lal10g0823 10 15883311 15886984 ECH