Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0814 ATGGATGGAATTTTTACTTACATTATTTCCTCTCTGGCTATGCTTATTTTATTTTCACTAATGTTCTTTCTCTTACCAAAACTAAATAGAAGGCCTCAAAATCACACAAGTGCAAAGCTTCCTCCAGGTTCAATGGGATGGCCTTACATAGGACACACCTTCCAACTCTACTCCCAAGACCCAAATGTTTTCTTTTCTTCCAAACACAAAAGGTATGGAGAAATATTCAAGATCAACATCCTAGGATGCCCTTGTGTGATGCTGACAAGTCCTGAGGCTGCAAAATTTGTGCTAGTGACTCAAGCACACTTATTCAAACCCACATACCCCAAAAGCAAGGAACTTTTGATAGGCCCCTGTGCCTTGTTTTTCCACCAAGGAGACTATCACATGCGTTTGAGGAAGCTAGTTCAAAGGTCTCTATCCCTTGATGCACTTCACAACTTGGTGCCAGATATTGAAGCCTTAGCCTTATCTTCCATGAAATCTTGGGGTCATGGCCATGTTATTAACACTTTCAGAGAAATGAAAAGATTTTCTTTTGAAGTTGGTATCCTTTACAATTTTGGACACATAGAGCCTCAATTGAAGGGTGAACTAAAGAAGAACTATTGGATTGTAGACACAGGTTACAATTCTTTTCCAACTAACATCCCAGGAACACAATACAAAAAAGCACTTTTGGCAAGAAAGAGAATTGGTAAGATTCTAAGTGAAATAATTTGTGAGAGGAAGGAAAAGAAGTTGGTTGGAAGAGATCTATTGAGTTGTTTACTGAACTGGAAAGGTGAAAAGGGAGAAACCTTAAGTGATGACCAAATTGCAGATAACATTATTGGTGTGCTTTTTGCTGCACAAGATACCACAGCTAGTGTCATGACATGGATAGTGAAGTACCTACACGATGAACCGAAACTTCTCGAGTCGGTAAAGGCAGAACAGAAGGCTATTCAAAAATCAAATGAAGGTAACCAACCACTGAGTTGGAACCAGACTAGAAACATGCCAATTACCTACAAGGTTGTGTTAGAGAGTTTGAGAATGGCAAGCATTATATCATTCCCTTTCAGAGAAGCAGTGGCTGATGTAGAATATAAGGGTAACAAAATGTGGCAATTCTTGAAATTCCCACAGTCCAACGCCGTCCCCAGGATAAAACAGTCCAACTCTCTGTTATGCGATTTCTTACGTTGTCAGTTTACGAACTACTCACAATATGGCTACTTGTGCCAATTCTTAGTGCCACGGAAAGAAAGGGAGAGAAGGTTCTTAATACCAAAAGGGTGGAAAGCAATGCCTCTGTTCAGAAATATTCATCACAATCCAGAATTTTTTCCAGACCCTAAAAAATTCAACCCTTCAAGATTTGAGGTGGCACCAAAACCCAATACTTTCATGCCATTTGGTAGTGGAGTACATTCTTGCCCAGGCAATGAGCTTGCTAAATTGGAGACCCTTATTATGATCCATCATTTGATCACCAAGTTTAGGTGGGAAGTGGTAGGATCACAATGTGGGATTCAATATGGCCCATTTCCATTGCCATTCAATGGACTCCAAGCTAGATATTGGGAAGAATCTACCATCTAG 1590 0.4 MDGIFTYIISSLAMLILFSLMFFLLPKLNRRPQNHTSAKLPPGSMGWPYIGHTFQLYSQDPNVFFSSKHKRYGEIFKINILGCPCVMLTSPEAAKFVLVTQAHLFKPTYPKSKELLIGPCALFFHQGDYHMRLRKLVQRSLSLDALHNLVPDIEALALSSMKSWGHGHVINTFREMKRFSFEVGILYNFGHIEPQLKGELKKNYWIVDTGYNSFPTNIPGTQYKKALLARKRIGKILSEIICERKEKKLVGRDLLSCLLNWKGEKGETLSDDQIADNIIGVLFAAQDTTASVMTWIVKYLHDEPKLLESVKAEQKAIQKSNEGNQPLSWNQTRNMPITYKVVLESLRMASIISFPFREAVADVEYKGNKMWQFLKFPQSNAVPRIKQSNSLLCDFLRCQFTNYSQYGYLCQFLVPRKERERRFLIPKGWKAMPLFRNIHHNPEFFPDPKKFNPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLETLIMIHHLITKFRWEVVGSQCGIQYGPFPLPFNGLQARYWEESTI 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0814 529 Gene3D Cytochrome P450 29 378 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal10g0814 529 Gene3D Cytochrome P450 415 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal10g0814 529 SUPERFAMILY Cytochrome P450 36 367 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal10g0814 529 Pfam Cytochrome P450 41 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal10g0814 529 Pfam Cytochrome P450 423 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal10g0814 529 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal10g0814 529 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal10g0814 529 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal10g0814 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Lal10g0814 529 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal10g0814 529 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal10g0814 529 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal10g0814 529 PRINTS E-class P450 group I signature 434 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal10g0814 529 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal10g0814 529 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal10g0814 529 SUPERFAMILY Cytochrome P450 423 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal10g0814 529 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 421 523 - -
Lal10g0814 529 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 13 368 - -
Lal10g0814 529 PANTHER CYTOCHROME P450 26 13 368 - -
Lal10g0814 529 PANTHER CYTOCHROME P450 26 421 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0814 Lal-Chr10 15808887 15813604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0814 20 527 Cytochrome P450 AT3G19270 58.939 0.0 609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0814 10 15808887 15813604 Lal10g0814 10 15808887 15813604 ECH
Lal8g0632 8 4395546 4399598 Lal10g0814 10 15808887 15813604 LSH