Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0807 ATGGAGAGAAAGTCATCCCTTGAAAAAATTCAGCCCCCAACTTATGGGAACTTAGTAACCATTCTAAGCATTGATGGTGGTGGTATTAGGGGTATCATCCCTGCAACCATTCTTGAATTCCTAGAATCAAAGCTTCAGGAGTTGGATGGTGAGGAAGCAAGGCTTGCAGACTACTTTGATGTGATGTCAGGAACAAGTACAGGTGGTCTTGTTACTGCTATGTTAACTGCTCCAGATGAAAACAAACGTCCACTTTTTGCTGCTAAAGATATCAAACCCTTTTACCTCCAACATTCTCCAAGAATTTTCCCACAACATAGAGGCCTTGGTGGGACAATATTAGCAAACTTAATGAGATCTTTAGGAGGACCCAAATACAATGGGAAATACTTGCATGGGGTTGTAAGAGAGAAGCTTGGAGACATTCGTTTGCATGAGACAATAACCAACGTTGTAATTCCCACCTTTGACATCAAGTGTTTGCAGCCAACCATTTTCTCTTCTTATCAGCTTAAGAAATCACCTTGCTTAGATGCTAAACTCTCAGACATATGCATCAGTACTTCTGCTGCACCTACTTATCTTCCTGCACATAACTTCAACATCCAAGATCCTAAAGGAAAGATACATGAATTCAACCTTATTGATGGTGGCGTTTGTGCCAACAATCCGACTTTAGTGGCTATGAATGAAGTAACAAGGCAGATCCTTCAAGAAAATTCAGATTTCTTTCCAATCAAGCCATTAGAATATGGTCGATTCTTAATAATTTCAATAGGCACTGGGACACCAAAAAATGAAGAAAAATTCAATGCAAATATGGCTGCAAAATGGGGCCTCTTGGGTTGGCTAACCCATGGTGGCTCTACTCCCTTAATCGATGTTTTTAGCCAATCAAGTTCTGATATGGTCGATTTTCATTTAGCTACTGTTACTCAAGCACTTCACTCCGAAAAGAACTACCTTCGTATCCAGGATGATACATTGATTGGAACAAACTCTTCGGTTGATGTATCTACTAAGGAGAATTTGGAGAAACTTTGCCAAATTGGTGAGAATTTATTGAAGACACGTGTCTCTAGGATCAATTTAGAGAATGGTCGATCAGAGCCAATAGAAAATGGGGAAACCAATGAAGAAGCTCTCATAAGGTTTGCAAAAATACTTTCACATGAAAGAAGACTCCGTGAAATGAAATCTCCACACATTAAAAAAGCCTTCTAA 1224 0.3946 MERKSSLEKIQPPTYGNLVTILSIDGGGIRGIIPATILEFLESKLQELDGEEARLADYFDVMSGTSTGGLVTAMLTAPDENKRPLFAAKDIKPFYLQHSPRIFPQHRGLGGTILANLMRSLGGPKYNGKYLHGVVREKLGDIRLHETITNVVIPTFDIKCLQPTIFSSYQLKKSPCLDAKLSDICISTSAAPTYLPAHNFNIQDPKGKIHEFNLIDGGVCANNPTLVAMNEVTRQILQENSDFFPIKPLEYGRFLIISIGTGTPKNEEKFNANMAAKWGLLGWLTHGGSTPLIDVFSQSSSDMVDFHLATVTQALHSEKNYLRIQDDTLIGTNSSVDVSTKENLEKLCQIGENLLKTRVSRINLENGRSEPIENGETNEEALIRFAKILSHERRLREMKSPHIKKAF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0807 407 Pfam Patatin-like phospholipase 22 229 IPR002641 GO:0006629
Lal10g0807 407 SUPERFAMILY FabD/lysophospholipase-like 17 372 IPR016035 -
Lal10g0807 407 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 22 229 IPR002641 GO:0006629
Lal10g0807 407 CDD Pat17_isozyme_like 16 367 - -
Lal10g0807 407 Gene3D Cytosolic phospholipase A2 catalytic domain 8 401 - -
Lal10g0807 407 PANTHER PATATIN 3 404 - -
Lal10g0807 407 PANTHER XYLOSE ISOMERASE 3 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0807 Lal-Chr10 15757662 15760641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0807 1 404 Miscellaneous Gene Families AT2G26560 63.614 0.0 526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0807 10 15757662 15760641 Lal10g0807 10 15757662 15760641 ECH