Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0795 ATGGCGAAATCGAGTGCTGACGATGTTGAGCTTCGTCGAGCTTGCGAATCTGCAATCGAGGATCCAAAGCATAAGATTCTCATTTCGATCCGTGTTGCCAAGACTCACGGGATTTTTGGAAAACCTTCCAAGCTTGGTCGTCAAATGGCCAAGCCTAGGGTTCTCGCTCTTTCTACAAAATCAAAAGGTCAGAACACAACAGCTTTTCTTCGAGTTTTGAAGTATTCTACAGGAGGAGTTCTTGAGCCTGCAAAACTATACAAGCTGAAGCACCTTGCAAAAGTGGAAGTTATAACTAATGATCTCAGCGGATGTACGTTTACATTGGGATTTGATAACCTTAGAAGTAAAAGTGTCGCTCCACCTCAGTGGACAATGCGCAATATTGATGACAGGAATCGCCTCCTTCTTTGCATCTTAAACATCTGCAAAGATGTGTTGGGTCGCCTGCCTAAGGTTGTTGGTATAGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAACAGACCTTCAGTTTCTACTCCAAGGAATGTGCAAGATGGTGGTCCTGTTGCATCTGCTGTGCCTGAGACCGAATTGAAAGTCAATGTCGAAAAGGAACTTGTCTCCCAAGCAGAGGAAGAGGACATGGAGGCCCTTTTGGGAACTTATGTCATGGGTATTGGCGAAGCAGAGGCATTTTCAGAAAGGTTGAAGAGAGAGCTCCAGGCTCTAGAAGCAGCAAATGTGCATGCCATTTTAGAAAGTGAACCTTTGATGGATGAGGTGATGCAAGGGCTTGAATCAGTAACAATTTGTGTGGAAGACATGGATGAATGGTTAGGCATATTTAATGTGAAACTCCGGCACATGAGAGAGGATATTGAGTCAATAGAAACCCGCAATAACAATTTGGTAACGCAATCGGTTAATAACAAGTCTCTCATCGAGGAGCTTGATAAGCTTCTTGAGCGACTGCGTGTCCCTTCTGAGTACACAGCATCTTTGACTGGAGGTACATTTGATGAAGCTCGAATGCTTCAAAATGTAGAAGCATGTGAGTGGTTGACTAGTGCCTTGCGTGGTATTGAAGAACCTAATCTAGACCCTGCATATGCAAACATGAAAGCTTATGGCAAATATGTACAAGACTTGGAAGTTTTCTTTTCTGATGGTGGTTCCTGCTTCCTCCTACAGGTTAAAGAGAAGCGTGCAGAACTTGAAAAACTAAAATCTAGCTTTGTCAGGAGAGCTTCTGAATTCTTGAGAAATTACTTTGCTAGTTTGGTAGACTTCATGACAAGTGATAAAAGTTACTTTTCTCAGCGGGGACAGTTGAAGAGGCCCGATCATGCTGACTTGCGGTACAAGTGCAGAACATATGCACGTCTTCTGCAGCATTTAAAGAGTCTTGACAAGAATTGCTTGGGTCCATTGAGAAAAGCTTATTGCATTTCTCTAAACTTTCTTCTTCGTAGAGAGATTTGTCTCACCAGGCAGAAGTCTAGATGGGCTGTTTGTGGATGCAATCATGAGAGGGTTAAGTTTAGGCATATGGAGTCTCTAAAGTTTCATCCTTTACAGGCCCGTGAGTTTGCAAATGAACTTCGTGCTAGTACTAAAGCATCTAGAAGTCCAACTGTCTGGCTTGAAGGTTCCACAGGTTCTGGTCAGAATGCAAATGCTACTGACACTTCTACAGTCTCTGATGCCTATGCAAAGATGCTCACAATTTTTATCCCACTTCTGGTGGATGAGAGTTCTTTTTTTGCACACTTCATGTGCTTCGAAGTTCCTACAGTTGTTCCTCCAGGAGGTGTTGCTAATGGTAATAAAACTGGATATGATGATGATGCCAATGATGATGATTTGGGAATTATGGACATTGATGAGAATGATAGCAAATCTGGTAAAACTTCTGCAGAGCTTGCAACTTTAAATGAATCACTTCAGGAATTGCTTGGTGGAACTCAAGAAGACTTTTATGCTGTTGTGGATTGGGCGTACAAGATTGATCCTTTACGCTGCATATCAATGCACGGAATAACAGAATGCTATCTCTCTGGTCAGAAAGCTGACGCAGCAGGATTTGTACGCCTTTTGCTTGGTGACCTAGAGTCTAGGATATCTAAGCAATTCAGCCGTTTTGTTGATGAAACATGCCTTCAAATTGAAAGGAATGAGCGCAATGTTCGCCAAACGGCTGTCTTGCCCTACATCCCCAGATTTGCAACCCTTGCAACTCGGATGGAGCAGTACATTCAGGGACAGTCTAGGGATTTGGTGGACCAAGCATACATTAAATTGGTTGGCATAATGTTTGCCTCTTTGGAAAAAGTTACTCAAACAGATCCAAAGTATGCAGATATTTTTCTACTAGAAAACTATGCTGTCTTTCAGAACAGGCAAGTTTTTTCCTTTACCCCGTCAAGGGGAATCTTTTTAAATTCTTCAGGGTCTGTTCGCGAGTTGGTTTTGGGAAGTTTGTATGACCTCGCCAACATTGTGTCCACATTGGGTAAGTTTTATCATGAAGCTAGTGAAGCCTATGAACAAGCTTGTACACGGCATATTAGCATGATTATCTACAATCAATTTGAACGTCTCTTCCAATTTGCTAGAAAGATTGAGGACTTGATGTTCACTGTTGCACCTGAAGAGATTCCTGCCCACCCTGGACTGTCAAAAATGGATCTACGGAAGATGTTAAAATCCAGTTTATCTGGGGTTGACAAGTGCATTGCTGCAATGTATAAGAAACTACAGAAGAATTTGAGTTCGGAGGATTTGTTACCTTCCTTATGGGACAAATGCAAGAAGGAGTTTCTTGATCAGTACGGAAGTATTGCTCAACTTGTGGCCAAGATTTACCCCACTGAGAATATCCCTTCTGTAGCTGAGATGAGAGACCTTTTGGCTTCCATGTAA 2907 0.4245 MAKSSADDVELRRACESAIEDPKHKILISIRVAKTHGIFGKPSKLGRQMAKPRVLALSTKSKGQNTTAFLRVLKYSTGGVLEPAKLYKLKHLAKVEVITNDLSGCTFTLGFDNLRSKSVAPPQWTMRNIDDRNRLLLCILNICKDVLGRLPKVVGIDVVEMALWAKENRPSVSTPRNVQDGGPVASAVPETELKVNVEKELVSQAEEEDMEALLGTYVMGIGEAEAFSERLKRELQALEAANVHAILESEPLMDEVMQGLESVTICVEDMDEWLGIFNVKLRHMREDIESIETRNNNLVTQSVNNKSLIEELDKLLERLRVPSEYTASLTGGTFDEARMLQNVEACEWLTSALRGIEEPNLDPAYANMKAYGKYVQDLEVFFSDGGSCFLLQVKEKRAELEKLKSSFVRRASEFLRNYFASLVDFMTSDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCISLNFLLRREICLTRQKSRWAVCGCNHERVKFRHMESLKFHPLQAREFANELRASTKASRSPTVWLEGSTGSGQNANATDTSTVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPTVVPPGGVANGNKTGYDDDANDDDLGIMDIDENDSKSGKTSAELATLNESLQELLGGTQEDFYAVVDWAYKIDPLRCISMHGITECYLSGQKADAAGFVRLLLGDLESRISKQFSRFVDETCLQIERNERNVRQTAVLPYIPRFATLATRMEQYIQGQSRDLVDQAYIKLVGIMFASLEKVTQTDPKYADIFLLENYAVFQNRQVFSFTPSRGIFLNSSGSVRELVLGSLYDLANIVSTLGKFYHEASEAYEQACTRHISMIIYNQFERLFQFARKIEDLMFTVAPEEIPAHPGLSKMDLRKMLKSSLSGVDKCIAAMYKKLQKNLSSEDLLPSLWDKCKKEFLDQYGSIAQLVAKIYPTENIPSVAEMRDLLASM 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0795 968 Pfam Exocyst complex component Sec3 224 951 IPR019160 GO:0000145|GO:0006887
Lal10g0795 968 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 49 144 IPR028258 -
Lal10g0795 968 PANTHER SEC3/SYNTAXIN-RELATED 820 968 - -
Lal10g0795 968 PANTHER SEC3/SYNTAXIN-RELATED 521 795 - -
Lal10g0795 968 PANTHER SEC3/SYNTAXIN-RELATED 1 488 - -
Lal10g0795 968 Coils Coil 221 248 - -
Lal10g0795 968 Coils Coil 281 301 - -
Lal10g0795 968 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 521 795 - -
Lal10g0795 968 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 488 - -
Lal10g0795 968 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 820 968 - -
Lal10g0795 968 SMART Sec3_PIP2_bind_2 48 146 IPR028258 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0795 Lal-Chr10 15658524 15673098 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0795 10 15658524 15673098 Lal10g0795 10 15658524 15673098 ECH
Lal8g0608 8 4213190 4225630 Lal10g0795 10 15658524 15673098 LSH
Lal25g0566 25 4175734 4195439 Lal10g0795 10 15658524 15673098 LSH