Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0779 ATGAAACAATCTATGTTGCCTCCAAAGAAGCGAAAATACGACAGACCTTCATTAGAATCACCACCATCTTTGACGCCAGTAGCATTTGAAGAAAGGCCACCCTCTTCGCAAACCTTAACCGTACTACCAACTCAGTCATTGACTCAAAAGGAGATCGCTGCGAAGCAACGAAACAAGGATGAAATTCGAAGAGTGTACAAATGCCTCAAGCATATTAAATTTTGCTTGTCTCGAAAAGAGAAATCTTTTGCGTCTGACCTTGAAAAGGGTTACCTCACTCTCATTGCTGCTTCCAAAGGTTGTAGGAGTGTGCGACGTATTGTGGCTGATCTTATTCCTCAATATGCATGTTACTGCCCAACAAATTTGGAAGCTGCAGCTGAAGTGATAATTGATATGCACAACTGGAGTTTGGCATTGATTAACAGAGGAGAAGATTCTAATGGTATTGCATTTGCAACTGCTAGAGCCTGTATTTTTGGCCTAGCTGACATCTGCTGCACTGCTTCTTCGGTGGCACCAAAATCTGCTGTGACTAGGGGAATTAGCTCTGCAGTTTTTCAGAATGTGTTAACCTTTTTTATGGCCTTGTTTGAGGGGAAGGATGTTATGCAGTTCGTTGACAAGAATTTCCTGAATATGCAAGATTCTATTGAGGTCTTCTCAGAGTTGAAGCAAAAGGTTTTAGATGAAGATGGATGTTCATTGACTAAACTGCCCAGATCCTGTGCATTGTGTCTACTTTGGATTTTCTTCTCTTGTCCAAAAGACTTGCTTGCAGCTTGTTTTGTGCTCTTAGGCTGTGTTGCAAAAGAAAAAGCTTCCATAGGGCAGCATTTTATGGGCTTGGTGACTAGCACCTTGGATGATGATGCAGTTCAACTTTTGGATAGTGCAAATGATGAACCTAAATCATGCACAGGTTCTACTGGTTCAGACATCAGAGATCATGAGGGTGATGAGGAAATTACGACTAATGACAACCATGTTTCTGAGAGTAATTCATCAGTTTGTAATAGCTGCTTGCTCATGCAGGTTCTTAACAAGGACTCCTCACTGAGGAAATGGATGTTGTGTAAATGTAAGAAGTTATTGGACTTGCTTACTGATTCTTCACCTGAAATCTCGTCAGTACTTCAAGGAATTCTTGAAATGTTTGCTCAACAAGCAGATTTGGAAGACTGCCAGGTAGATAGTGATGAAGATAAATCCGATAGTTCAATTTACATGAATAGGAACTGTGTGGTTCCTATGATCTCTGAGGAACATGACATTGTCGGCGAATCATCTGGAAAAGTTGGCAATTCAAAATTTCCTTTCGATTTGTCTACTGATTGTCTCACCGACAAAGTTACTGATAAACATTTGATAGCTCATGGCTCTGCAGTTTCTCTTGTCACCATTCCTGTCTCAAAAGGGGGTTCTCCCTTTGACGATAGAGTATATAGGCCAATAGGGGAGGAAGGGAATATGCCCACTGTTATATGCTCCACACCCAGAGACTCAGTAAGCCATCAGATATTGCCATCTGTAGTTAGAATACCAGTAGACATTAAGAGTAATTCATGTGAAGTTAGTGACGGTTTTCCGAATGTTGAGAAAAACCAAGTATTTAATCTGAATATCAATTCACCTCCAGTAAGGTCTTCTAGTGGAACTGAAAGTAATATTCATATATTCCCTAATCGTTCATTTATGTCACCATCTGCATCAAAAAATCAAATTGCCTGGTGCTGTGATGGAGATCCTGCAGCCATGGATATTGTCTCTGCTTCTAAGCAGCTCTGGGTAGGTTATGTAGGGCCTGACATGTCTGAAAGCCATATTAGGTTTCAATTAGAGAGGTTTGGTCCTATTGAGCAATATTTTTTCTTCTCAGTGAAAGGATTTTCCTTAGTTGAGTATAGAAGGATCATTGATGCGGTAAAAACTCGACACTATTTACCTGGAAGTTTTCCATGTTGTGTAAAATTCATGGATATAGGATTTGGAACTAGGGGTGCTATGAATGGTTTGGCAATTGGCTATAGTTCTTATATATATGTTGGACATATTTCCAGTCAATGGGCCAAGGATGAGATCCTGCATGAAGCATGGAAAGTAATCTGTAAATGTCCTCTCTCAGTTATTGATCTTAGCTGTGAGTGTGCATTACTTATGGAGTTTGAAACTCCTGAAGAAGCTGTCTCTGTCATGTTGCATCTGAGACAGTTCCGAAGGGAAAGAAGTAAATATAAATCACATTCTGCTCCAGTAACAGGTAATGCTGGAATTGGGCATGTTTATTCGGATGGTGCAAGACATGTGTCTGGCCCTCCCCATCTTGAGCTTAGAACCAACAACCAAGTTGCTGGATCACCTCATGCTCGGACTTCACCTGAGAACCCTGCTGACAGTGCTCACACTAGGATGTCTCACTTGTCTTCTTTACTAGCATCATTGCGTACAAAGTATAATATTAATCAAAACATAGGTATCCGTGATAACTATATTGCTGGAAATAGTTATGCTTTTTCCATGCATGGTGAAGATATAGTTCCATCCAGCACTCTGTGGATAACTATTCCAAGTAGCGGCTCTCTGTTTCTCACAGATGATGAGCTAATGGCTATTTGCAACCTTGCTGTTGGAAACTCTGGCTCCATAGTGCGGCTGACACAAGCAAATATGAAGATGGGATGTGGTTGGTTTGTTGAATGCAATAATGTTGATGGTGCAGTTTCTGTTCTTAAGAATCTTCGTGGTTGTCCAGGATTATTCTTCCAGATCGAGTTCAGCAAACCTGGAAATCAGAATGCTCTGCCATTTCCAATTATGCCAGTGAAAAACTCTAAGGAGCACATATCCCCCAGAATAAATTATGAGAATCATGGTGGTGGTGTACAGGGTGCACCTATGTCTCAGTCAAACTGGCACTTTCCTGGTTCCAGGGAGATGACAGAAGTTGGATCAAGGAAGGCTGATAGTTATAATAATTTATCAATCAATCCTCAACAAGGAGGTAATACTATGGAAGCACGAATCATTAAAGAAAAAACTGTATTTCTTTTCTCTCTTTTTTTGTTGCTTTGGCATGCCTGTAATGTTTCACATTTACTCTCTGTAACACAAGGACCTTCCGTTCCACCACCACAGCAAATTCAATCCTCTACAATCATTCGCCCCATATATGGTCCTCCAAATGGTCCATGGGATTCACAGGGAATGAATAATCATTTACATGTCAATCAATTCAGGGCAAGAGTAATGGCAAATAATTTTCATGGTGGCGATGCTCTAAATCCTTTTGGAGCAAGGAAGGCTGACACAATTGATCCTCAACAAGGAGGTAATGTTTCACATTTACTCTCTGTAACACAAGGACCTTCCGTTCCACCACCACAACAAGTTCAATCCTCTACAATCATTCGCCCCATATATGGTCCTCCAAATGGTCCATGGGATTCACAGGGGATGAATAATCATTTACATGTCAATCAATTCAGGGCAAGAGTAATGCCAAATAATTTTCATGGTGGTGCTGCTTTAAATCCTTTTGTACCTGCTTCAGTAACTCCATTTGCTCAGATACAGGGAACTCCAATGCAGCCTTATAACCAGCTTATTCCTCGACCAGTTATACCACCACTTTTATCATCTTTACCACATCCTCACTCTGAAATACCTGCTCTGCCTCCTTTACCTCAGACACAGCCACCCTTGGTTCCTCCTCCGCCTTGTTCTCCTCCTCCACCACTGCCTGTCCAAGAATCAGTCAATATGGGATGTTCAAAGAAGATTCAAATATTTGCGCTACACAATGCCATACCTGAGCCTGCTGAATGGCCCACAAAACTAGACATGACTAAACGCACCGATTTCCAACATGTGAAATCAACATTTACTGCTACTCCACCTAATAGAGTTATCAGTTATCCTTTGGCTTCCCGCCTCTCCCTAGCCATCTCATGCTCACTGTTTCATGAATTGCTTGTCTAA 3978 0.412 MKQSMLPPKKRKYDRPSLESPPSLTPVAFEERPPSSQTLTVLPTQSLTQKEIAAKQRNKDEIRRVYKCLKHIKFCLSRKEKSFASDLEKGYLTLIAASKGCRSVRRIVADLIPQYACYCPTNLEAAAEVIIDMHNWSLALINRGEDSNGIAFATARACIFGLADICCTASSVAPKSAVTRGISSAVFQNVLTFFMALFEGKDVMQFVDKNFLNMQDSIEVFSELKQKVLDEDGCSLTKLPRSCALCLLWIFFSCPKDLLAACFVLLGCVAKEKASIGQHFMGLVTSTLDDDAVQLLDSANDEPKSCTGSTGSDIRDHEGDEEITTNDNHVSESNSSVCNSCLLMQVLNKDSSLRKWMLCKCKKLLDLLTDSSPEISSVLQGILEMFAQQADLEDCQVDSDEDKSDSSIYMNRNCVVPMISEEHDIVGESSGKVGNSKFPFDLSTDCLTDKVTDKHLIAHGSAVSLVTIPVSKGGSPFDDRVYRPIGEEGNMPTVICSTPRDSVSHQILPSVVRIPVDIKSNSCEVSDGFPNVEKNQVFNLNINSPPVRSSSGTESNIHIFPNRSFMSPSASKNQIAWCCDGDPAAMDIVSASKQLWVGYVGPDMSESHIRFQLERFGPIEQYFFFSVKGFSLVEYRRIIDAVKTRHYLPGSFPCCVKFMDIGFGTRGAMNGLAIGYSSYIYVGHISSQWAKDEILHEAWKVICKCPLSVIDLSCECALLMEFETPEEAVSVMLHLRQFRRERSKYKSHSAPVTGNAGIGHVYSDGARHVSGPPHLELRTNNQVAGSPHARTSPENPADSAHTRMSHLSSLLASLRTKYNINQNIGIRDNYIAGNSYAFSMHGEDIVPSSTLWITIPSSGSLFLTDDELMAICNLAVGNSGSIVRLTQANMKMGCGWFVECNNVDGAVSVLKNLRGCPGLFFQIEFSKPGNQNALPFPIMPVKNSKEHISPRINYENHGGGVQGAPMSQSNWHFPGSREMTEVGSRKADSYNNLSINPQQGGNTMEARIIKEKTVFLFSLFLLLWHACNVSHLLSVTQGPSVPPPQQIQSSTIIRPIYGPPNGPWDSQGMNNHLHVNQFRARVMANNFHGGDALNPFGARKADTIDPQQGGNVSHLLSVTQGPSVPPPQQVQSSTIIRPIYGPPNGPWDSQGMNNHLHVNQFRARVMPNNFHGGAALNPFVPASVTPFAQIQGTPMQPYNQLIPRPVIPPLLSSLPHPHSEIPALPPLPQTQPPLVPPPPCSPPPPLPVQESVNMGCSKKIQIFALHNAIPEPAEWPTKLDMTKRTDFQHVKSTFTATPPNRVISYPLASRLSLAISCSLFHELLV 1325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0779 1325 Gene3D - 584 670 IPR012677 -
Lal10g0779 1325 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 1117 1301 - -
Lal10g0779 1325 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 2 1098 - -
Lal10g0779 1325 MobiDBLite consensus disorder prediction 779 802 - -
Lal10g0779 1325 MobiDBLite consensus disorder prediction 1 38 - -
Lal10g0779 1325 PANTHER NUCLEIC ACID BINDING PROTEIN 1117 1301 - -
Lal10g0779 1325 PANTHER NUCLEIC ACID BINDING PROTEIN 2 1098 - -
Lal10g0779 1325 SUPERFAMILY RNA-binding domain, RBD 582 652 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0779 Lal-Chr10 15513261 15520741 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0779 10 15513261 15520741 Lal10g0779 10 15513261 15520741 ECH
Lal25g0602 25 4536622 4554896 Lal10g0779 10 15513261 15520741 LSH