Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1428 ATGGTCTTCAAGGGAAGGTTCTTCTCTTCCAAGAAATCCGATTCTTCTAGCCCCGATGCGTCCTCCAATAGTCCTCGATCTTTCTCCTCCAATTCCCCTTCCAGATCCGACAAGAAAAAAACTAAATCCGCCGCGAATCAAACCCTAGCCGCCGCTTCCGCCGTCGGCAGCGGCGGCGGCGGCGGTCTCGCTCCGTGCCGGCAGACGCAGGTCAAGGATGGAACTAAGAAGAAGGATGTGGTCAAGGGGAAAGAAAGTCAAACGCCGCCGCCGGATTCTCGAAAGGATTCTCCGGCAAAGAAGTTGATGGCGGCGGAGGGACGGGAGTCGCCGTCGTCGTTGTCGGTGTCGCCGATTCTGGCGTCGTCGCTGGGGCTGAACAGGATCAAGACGAGATCGGGGCCGCTGCCGCAGGAGAGCTTCTTCGGATTCAGGGGCGAGAAAGGGACGGCGGCGCTCGGCGGCAGCAACCTCTCCCGGCCGGGTGTCGGTGCCCGCGCCGGCGATGGGAAGAAGAAGGAGGTGGCGAACCAGAGCAGGGTGGGGTTTCATGAGGATTCCGTCGGCGGTGCCGCCGCCACCGGAGGTTGGGGCGATAACGGGAGCAATTCCGATAGCGTTTCGACGTCGGGGAGCTTGCCGTCGCGGGAGCAGAGTCCGGTCGTGTTGCCGCGGTCGCGGTTGCAGAACGGAGAATCATCATCGGAAGCTGCAGGCAAACAGGTATCATCACGGGCTCAGTCTGGAGGCTTAAAAAGTGCAGATATTTGTACTCCAGAGACAGCATATGATTTTGAAAACCCAAAGGAGTCTGAATCTCCTCGTTTTCAAGCTATATTGCGCGTCACTAGTGCACCCAGAAAGAGGTTTCCTTCAGATATCAAAAGTTTTTCCCACGAGCTGAATTCGAAAGGTGTCTGGCCTTTTCCATTTTCGAAGCCTCGGCGGTTAAATAACCTTGAGGAGATTTTGGTTGTTATTAGAGCAAAATTTGATAAAGCAAAGGAAGACGTGAACTCTGATCTGGCTATTTTTGCGGCAGACCTGGTTGGAATTCTTGAAAAAAATGCAGATACTCATCCTGATTGGCAAGAGACCATTGAGGACTTGCTAGTTTTGGCCAGGAGCTGTGCTATGACTTCATCCGGTGAGTTTTGGCTTCAGTGTGAAAGCATAGTTCAGGAGTTGGATGATAGGCGTCAAGAGCATCCTCCAGGGATGCTAAAGCAGCTTCACACTCGAATGCTTTTCATTCTCACAAGGTGTACCCGATTATTGCAATTCCATAAGGAAAGTGGTTTGGCTGAGGATGAACCTGTTTTCAATCTCCGTCAATCCAGAGTCTTGCATTCTGCTGGAAAATTTATTCCTCCTAGTGTGGGAAGGGATACTAAAAGTTCAAGTGCTGCAAAGGCCTTAAAGCCTTCATCGAAAAAAGCTTTTAGTCAAGAGCAGAGTATGATGGGTTGGAAGAAAGATGTTATGCAACCAGAAAATTTATCTATTCCTGCTGATGATGACAATGCAAAACTCTTTGACTCTTCTTCAGGCAGGAATCGAATGGCTTCTTGGAAGAAATTCCCTTCTCCAACAGGAAGAAGCCCTAAAGAAGCTGTTCAGTTGAAGGACCAAAATTATGGGAGGGTTGAATCTTCAAAGGCATCAAATAATAAGAGATTCACTTCCGATGTGGATCTCTCTACTGCTAAGCCATCTGAGCTTCTTCCTGTCAAAGATTCCTTGGATCATGCTTCCAAACACCAACACAAAGTTTCCTGGGGATACTGGGGAGATCAGCAGAATAATAATAGCGAGGAGAATTCAATAATCTGTCGTATATGTGAAGAGGATGTTCCTACTTCACATGTTGAAGATCATTCAAGGATTTGTGCAGTTGCTGATAGATGTGATCAGAAGGGACTGAGTGTCAATGAGCGTCTTGTCAGAATTTCTGATACACTAGAAAAGATGATGGAATCATGCACACAAAAGGATACCCAACAAATGGTGGGAAGTCCCGATGTTGCAAAAGTGTCAAATTCTAGTATGACTGAAGAATCTGATGTTCCTTCACCTAAACTTAGTGATTGGTCTCGCAGAGGCTCAGAGGACATGCTTGACTGTTTCCCTGAAGCCGACAATTCTGTTTTTATGGATGACCTAAAAGGATTACCACTTATGTCATGTAAAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCCTCTGCAGGGAGCATGACTCCCAGGTCTCCATTGATGACACCACGGACAAGTCAGATTGACTTGCTCTTGGCAGGGAAGGGTGCTTATTCTGAACATGATGATCTGCCGCAGATGAATGAACTTGCTGACATTGCGCGCTGTGTGGCAAATGCACCTTTGGATGATGATCGCACGACGTCATATTTATTATCTTGTCTTGATGATTTGCGGGTTGTTGTAGATAGAAGGAAATTTGATGCACTTACTGTGGAGACCTTTGGAACACGTATTGAGAAGCTGATTCGAGAGAAGTATCTGCAGCTCACTGAGATGGTGGATGTTGAAAAGATAGATACAGAGAGCACTGTTGATGATGATATCTTGGAAGATGATGTGGTTCGCAGCTTGAGAACAAGCCCAATCCATTCTTCAAGGGATCGCACCTCTATTGATGACTTTGAGATTATAAAACCTATCAGTCGTGGGGCATTTGGAAGGGTTTTCTTGGCTAAAAAGAGAACAACTGGTGATCTTTTTGCAATAAAGGTTCTCAAGAAGGCAGATATGATCCGTAAGAATGCTGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTACGCAACCCTTTTGTGGTTCGATTCTTCTATTCTTTTACATGTCGCGAGAACTTATATCTTGTCATGGAATATCTTAATGGAGGTGACCTGTATTCATTATTAAGGAATTTAGGTTGCTTAGATGAGGAAGTCGCCCGTGTATATATTGCTGAAGTGGTGCTTGCATTAGAGTATTTGCATTCACTGCGTGTGGTTCATCGTGACTTGAAGCCCGACAATTTATTGATAGCACATGATGGTCACATCAAGTTAACAGACTTTGGGCTTTCTAAAGTTGGTCTCATCAACAGCACAGATGATCTGTCTGGTCCAGCAGTGAATGGGACATCACTACTTGAAGAAGATGAAACTGATGTATTTACATCCGCGGATCAAAGGGAAAGGAGGGAGAAACGTTCTGCAGTGGGCACACCTGATTACTTAGCCCCAGAGATACTTTTGGGAACTGGACATGGGTTTACTGCCGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAATGCAGAGCACCCTCAGATTATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCAGCAGTTCCTGAAGAGATGAGTCCTGAAGCACTGGATCTTATTGATCGATTATTGACAGAAGATCCTAATCAAAGACTAGGATCCAAAGGGGCATCAGAGGTAAAGCAACATGTTTTCTTCAAGGATATAAACTGGGACACACTTGCCAGGCAGAAAGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTAGATACCAGTTACTTCACTAGTCGCTACTCATGGAATACTTCTGATGGTTTTGTATATCCAGCAAGTGATGTTGAGGATTCTAGTGATGCTGATAGCTTAAGTGGCAGCAGTAGTTGTTTGAGCAATCGACAAGATGAAGTGGGAGATGAATGTGGGGGTCTTACCGAGTTTGATTCTGGCACATCTGTCAATTACTCTTTTAGTAATTTCTCCTTTAAGAATCTCTCCCAGCTTGCATCAATCAACTATGATCTCACCAAGGGATGGAAAGATGACCCGGCAACGAACTCTAGTGCATAG 3906 0.4588 MVFKGRFFSSKKSDSSSPDASSNSPRSFSSNSPSRSDKKKTKSAANQTLAAASAVGSGGGGGLAPCRQTQVKDGTKKKDVVKGKESQTPPPDSRKDSPAKKLMAAEGRESPSSLSVSPILASSLGLNRIKTRSGPLPQESFFGFRGEKGTAALGGSNLSRPGVGARAGDGKKKEVANQSRVGFHEDSVGGAAATGGWGDNGSNSDSVSTSGSLPSREQSPVVLPRSRLQNGESSSEAAGKQVSSRAQSGGLKSADICTPETAYDFENPKESESPRFQAILRVTSAPRKRFPSDIKSFSHELNSKGVWPFPFSKPRRLNNLEEILVVIRAKFDKAKEDVNSDLAIFAADLVGILEKNADTHPDWQETIEDLLVLARSCAMTSSGEFWLQCESIVQELDDRRQEHPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEPVFNLRQSRVLHSAGKFIPPSVGRDTKSSSAAKALKPSSKKAFSQEQSMMGWKKDVMQPENLSIPADDDNAKLFDSSSGRNRMASWKKFPSPTGRSPKEAVQLKDQNYGRVESSKASNNKRFTSDVDLSTAKPSELLPVKDSLDHASKHQHKVSWGYWGDQQNNNSEENSIICRICEEDVPTSHVEDHSRICAVADRCDQKGLSVNERLVRISDTLEKMMESCTQKDTQQMVGSPDVAKVSNSSMTEESDVPSPKLSDWSRRGSEDMLDCFPEADNSVFMDDLKGLPLMSCKTRFGPKSDQGMTTSSAGSMTPRSPLMTPRTSQIDLLLAGKGAYSEHDDLPQMNELADIARCVANAPLDDDRTTSYLLSCLDDLRVVVDRRKFDALTVETFGTRIEKLIREKYLQLTEMVDVEKIDTESTVDDDILEDDVVRSLRTSPIHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVNGTSLLEEDETDVFTSADQRERREKRSAVGTPDYLAPEILLGTGHGFTADWWSVGVILFELLVGIPPFNAEHPQIIFDNILNRKIPWPAVPEEMSPEALDLIDRLLTEDPNQRLGSKGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGFVYPASDVEDSSDADSLSGSSSCLSNRQDEVGDECGGLTEFDSGTSVNYSFSNFSFKNLSQLASINYDLTKGWKDDPATNSSA* 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1428 1301 ProSiteProfiles Protein kinase domain profile. 890 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1428 1301 Pfam Protein kinase domain 890 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1428 1301 Gene3D Transferase(Phosphotransferase) domain 1 974 1197 - -
Gso9g1428 1301 MobiDBLite consensus disorder prediction 662 700 - -
Gso9g1428 1301 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1009 1021 IPR008271 GO:0004672|GO:0006468
Gso9g1428 1301 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 1299 - -
Gso9g1428 1301 MobiDBLite consensus disorder prediction 520 564 - -
Gso9g1428 1301 MobiDBLite consensus disorder prediction 733 757 - -
Gso9g1428 1301 MobiDBLite consensus disorder prediction 454 487 - -
Gso9g1428 1301 SMART serkin_6 890 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1428 1301 MobiDBLite consensus disorder prediction 9 32 - -
Gso9g1428 1301 MobiDBLite consensus disorder prediction 545 564 - -
Gso9g1428 1301 Coils Coil 317 337 - -
Gso9g1428 1301 CDD STKc_MAST_like 896 1184 - -
Gso9g1428 1301 MobiDBLite consensus disorder prediction 71 103 - -
Gso9g1428 1301 Gene3D Phosphorylase Kinase; domain 1 888 1208 - -
Gso9g1428 1301 ProSiteProfiles AGC-kinase C-terminal domain profile. 1180 1284 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gso9g1428 1301 MobiDBLite consensus disorder prediction 461 484 - -
Gso9g1428 1301 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 30 1299 - -
Gso9g1428 1301 MobiDBLite consensus disorder prediction 197 251 - -
Gso9g1428 1301 MobiDBLite consensus disorder prediction 662 691 - -
Gso9g1428 1301 MobiDBLite consensus disorder prediction 735 757 - -
Gso9g1428 1301 SUPERFAMILY Protein kinase-like (PK-like) 887 1219 IPR011009 -
Gso9g1428 1301 MobiDBLite consensus disorder prediction 147 253 - -
Gso9g1428 1301 MobiDBLite consensus disorder prediction 1 117 - -
Gso9g1428 1301 MobiDBLite consensus disorder prediction 166 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1428 Gso-Chr9 38342337 38354619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1428 1 1295 AGC Kinase Gene Family AT3G17850 64.706 0.0 1613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Gso9g1428 Pkinase 4.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1428 - - gmx:100776995 2426.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0877 7 10003012 10015640 Gso9g1428 9 38342337 38354619 GST