Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2053 ATGGGCTTCTTTCTGTTACCAAAAGCAACTCCTTGCATTTTGTTCTTGGCTCTGCTGTCTTGTACTTGCTTTACTTCTACAGATGCTTATGATCCACTCGACCCAAATGGGAATATCACAATCAAATGGGATATTATAAGTTGGACCCCAGATGGATATGTGGCTGTTGTTACGATGAACAACTTCCAACAATATCGTCATATCGCTTCACCTGGCTGGTCAATGGGATGGACATGGGCAAAAAAGGAGGTAATATGGAGCATGATGGGAGGGCAGACCACTGAACAAGGGGATTGTTCAAAATTTAAGGGAGGCATTCCACATTGCTGTAAGAAAGATCCGACGGTTGTAGATTTGCTACCTGGAACACCTTACAATCAACAAATTGCAAATTGCTGCAAAGGTGGGGTGCTCAGTTCATGGGTGCAGGATCCAACCAATGCAGTTTCCTCATTTCAAGTCAGTGTTGGTAGAGCTGGAACCACAAATAGAACTGTCAAAGTCCCAAAAAACTTCACCTTGAAAGCACCAGGACCAGGTTATACTTGTGGGCCAGCTAAGATTGTGGCACCCACTAAATTCATTACTTCAGACAAAAGGAGAGTGACCCAAGCACTGATGACATGGAATGTGACATGCACATACTCACAATTTCTGGCTCAAAAAACTCCCTCTTGTTGTGTCTCACTTTCATCTTTCTATAATGATACCCTTGTTCCCTGCCTAACATGTGCATGTGGCTGCCAAAGTAACTCATCTCAGTCAGGGACTTGTGTAGATCCAGATACACCACATTTGGCATCAGTTGTTGCTGGCTCTGGGAAGAATAACTTTTCACCTTTGGTTCAATGTACTCATCATATGTGCCCAGTCAGTATCCACTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGTGTGAAGGTTACTATTACTAATTATAATTACAGGATGAATTATTCTGAATGGAACATGGTTGTTCAACATCCAAACTTTGACAATCTGACTCAACTGTTCAGTTTCAACTACAAGTCATTGACTCCTTATGGTTCAATAAATGATACTGCAATGCTGTGGGGAGTTAAGTTCTATAATGATTTTCTAAACCAAGCTGGCCCTAATGGCAATGTTCAATCAGAGCTACTCTTCCGAAAGGATAAAGCAACTTTTACTTTTGATAAGGGTTGGGCTTTTCCTCGAAGGATCTACTTCAACGGTGACAACTGTGTAATGCCACCACCTGATGCTTATCCGTGGTTACCGAATGCTGGTGCTAGGCAAGAGGTTTCCTTGTTTGCTTTAGTGATAGCATCTTTGGTAGCCTTGGTATTTTATGCACCCGCATAA 1347 0.4232 MGFFLLPKATPCILFLALLSCTCFTSTDAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHIASPGWSMGWTWAKKEVIWSMMGGQTTEQGDCSKFKGGIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWVQDPTNAVSSFQVSVGRAGTTNRTVKVPKNFTLKAPGPGYTCGPAKIVAPTKFITSDKRRVTQALMTWNVTCTYSQFLAQKTPSCCVSLSSFYNDTLVPCLTCACGCQSNSSQSGTCVDPDTPHLASVVAGSGKNNFSPLVQCTHHMCPVSIHWHVKLNYKEYWRVKVTITNYNYRMNYSEWNMVVQHPNFDNLTQLFSFNYKSLTPYGSINDTAMLWGVKFYNDFLNQAGPNGNVQSELLFRKDKATFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGARQEVSLFALVIASLVALVFYAPA* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2053 448 Pfam COBRA-like protein 53 216 IPR006918 GO:0010215|GO:0031225
Gso8g2053 448 PANTHER PROTEIN COBRA 6 447 IPR006918 GO:0010215|GO:0031225
Gso8g2053 448 PIRSF COBRA 3 447 IPR006918 GO:0010215|GO:0031225
Gso8g2053 448 PANTHER COBRA-LIKE PROTEIN 6 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2053 Gso-Chr8 21851738 21855475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2053 1 443 COBRA Gene Family AT3G02210 73.274 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2053 - - gmx:100782876 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2223 18 55198206 55202053 Gso8g2053 8 21851738 21855475 GST
Gso19g0294 19 4338044 4341123 Gso8g2053 8 21851738 21855475 PCT
Gso8g2053 8 21851738 21855475 Gso13g0355 13 15061140 15065536 PCT
Gso8g2053 8 21851738 21855475 Gso19g0293 19 4333131 4337770 PCT