Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1982 ATGGCCGAGGAACCCCAAAAACCAGCCTCCGCTGAAGAAGTGGTGCCTGTTCCTGCGGACACGCCACCAACTACCCAATCTGAAGCTGAAGCTGAAGTTGAAGCAAATGCAGAAAGCATCGAAGAAGTGGTGGCGGAAGCAGAGAAGGCCCAGAGTGGTGTAGAAGACAAGATTTCCCAATCTGAAGCTGAAGCTGAAGTTGAAGCAAATGCAAAAAGCATCGAAGAAGTGGTGGCGGAAGCAGAGAAGGCCCAGAGTGGTGCAGAAGACAAGATTTCCCAATCGGTTTCGTTCAAGGAGGAGACCAACGTGGTTGGCGACCTCCCCGAGGCGCAGAGGAAAGCCCTTGATGAGCTCAAGAGGCTTGTTCAAGAAGCGCTCAACAACCATGAGCTAACTGCTCCCAAACCAGAACCAGAGAAGAAGAAAACGGAACTCAAAGCACTGGAGAAGAAGGAGGAAGAAGTCTCTGAAGAGAAGAAGGAAGTTGAAGTGACGGAAGAGAAGAAGGAAGCAGAAGTGACGGAGGAGAAGAAGGAAGCAGAAGTGATAGAAGAGAAGAAGGAAGCAGAAGTGATAGAAGAGAAGAAGGAAGTTGATGCGACGGAAGAGAAGAAGGAAGCAGAAGTGATAGAAGAGAAGAAGGAAGTTGAGGTGACGGAAGAGAAGAAGGAAGCAGAAGTGATAGAAGAGAAGAAGGAAACAGAAGTGATAGAAGAGAAGAAGGAAAGAGAAGTCCTAGAAGAAAAGAAGGAAGGTGTTGTTCCTATTAGTCCAGAGGAAGTTGAGATATGGGGAATTCCCCTGCTTGGGGACGAGAGGAGCGATGTGATTCTGCTAAAGTTTCTTCGGGCCAGGGATTTCAAGGTGAAGGATGCCTTGAGCATGCTGAGAAACACGGTGCGTTGGAGAAAGGAATTCGGAATCGAGGGTCTTGTCGAGGAAGATCTTGGAAGTGATTGGGACAAGGTGGTGTTCAGTCATGGACACGACAAAGAAGGGCACCCGGTGTACTACAACGTGTTCGGTGAGTTTGAGGACAAGGAGTTGTACAACAAGACATTTTGGGACGAGGAGAAGAGGAACAAGTTGATAAGGTGGATGATTCAGTCGTTGGAGAAGAGCGTGAGAAGCCTTGACTTCTCTCCGACAGGCATATCGACAATAGTGCAGGTGAACGACCTTAAGAACTCTCCTGGGCTTGGCAAGAGGGAGCTGAGGCAGGCCACCAATCAGGTCCTTCAATTGTTTCAGGATAACTACCCTGAGTTTGTGGCCAAGCAGATATTCATCAATGTTCCCTGGTGGTACCTTGCCTTTTCTAGGATGATCAGCCCCTTCTTCACACAGAGGACCAAGAGCAAATTTCTCTTTGCTGGCCCATCCAAATCTGCTCACACCCTTTTCCAATATATAGCTCCGGAGCTGGTGCCGGTTCAATATGGTGGACTTAGCCGAGAGGCTGAACAGGAATTCACCACTTCTGATCCTGTCACTGAGGTTACAATCAAACCCGCGACTAAGCATGCTGTTGAGTTCCCTGTTTCTGAGAAAAGTCATGCTGTTTGGGAAATCCGAGTGGTGGGCTGGGATGTCAGCTACGGTGCTGAATTTGTTCCCGGCGCTGAGGATGGTTACACTGTCATAGTTCAGAAGAACAGGAAAATTGGTCCCGCTGATGAGACCGTTATTACCAACGCTTTCAAAATTGGTGAACCTGGCAAGATTGTACTCACCATAGATAACCAAACTTCCAAGAAGAAGAAACTCCTCTACAGGTCCAAGACCAAGCCCATCCCAGAGTAA 1806 0.4839 MAEEPQKPASAEEVVPVPADTPPTTQSEAEAEVEANAESIEEVVAEAEKAQSGVEDKISQSEAEAEVEANAKSIEEVVAEAEKAQSGAEDKISQSVSFKEETNVVGDLPEAQRKALDELKRLVQEALNNHELTAPKPEPEKKKTELKALEKKEEEVSEEKKEVEVTEEKKEAEVTEEKKEAEVIEEKKEAEVIEEKKEVDATEEKKEAEVIEEKKEVEVTEEKKEAEVIEEKKETEVIEEKKEREVLEEKKEGVVPISPEEVEIWGIPLLGDERSDVILLKFLRARDFKVKDALSMLRNTVRWRKEFGIEGLVEEDLGSDWDKVVFSHGHDKEGHPVYYNVFGEFEDKELYNKTFWDEEKRNKLIRWMIQSLEKSVRSLDFSPTGISTIVQVNDLKNSPGLGKRELRQATNQVLQLFQDNYPEFVAKQIFINVPWWYLAFSRMISPFFTQRTKSKFLFAGPSKSAHTLFQYIAPELVPVQYGGLSREAEQEFTTSDPVTEVTIKPATKHAVEFPVSEKSHAVWEIRVVGWDVSYGAEFVPGAEDGYTVIVQKNRKIGPADETVITNAFKIGEPGKIVLTIDNQTSKKKKLLYRSKTKPIPE* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1982 601 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 314 489 IPR001251 -
Gso8g1982 601 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 498 593 IPR036598 -
Gso8g1982 601 SUPERFAMILY CRAL/TRIO domain 324 485 IPR036865 -
Gso8g1982 601 Gene3D - 323 500 IPR036865 -
Gso8g1982 601 ProSiteProfiles GOLD domain profile. 486 596 IPR009038 -
Gso8g1982 601 MobiDBLite consensus disorder prediction 1 102 - -
Gso8g1982 601 PANTHER PATELLIN-1 30 601 IPR044834 GO:0008289
Gso8g1982 601 MobiDBLite consensus disorder prediction 42 87 - -
Gso8g1982 601 Coils Coil 142 250 - -
Gso8g1982 601 Coils Coil 30 91 - -
Gso8g1982 601 SMART sec14_4 318 486 IPR001251 -
Gso8g1982 601 SMART CRAL_TRIO_N_2 275 300 IPR011074 -
Gso8g1982 601 Gene3D GOLD domain 501 596 - -
Gso8g1982 601 PANTHER PATELLIN-LIKE PROTEIN 30 601 - -
Gso8g1982 601 Pfam CRAL/TRIO domain 323 483 IPR001251 -
Gso8g1982 601 MobiDBLite consensus disorder prediction 134 185 - -
Gso8g1982 601 MobiDBLite consensus disorder prediction 128 185 - -
Gso8g1982 601 Gene3D - 244 306 - -
Gso8g1982 601 SUPERFAMILY CRAL/TRIO N-terminal domain 96 316 IPR036273 -
Gso8g1982 601 CDD SEC14 320 484 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1982 Gso-Chr8 20474359 20476916 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1982 8 20474359 20476916 Gso8g1982 8 20474359 20476916 ECH