Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1968 ATGGAACTCACCATCCCACGCAACCCCAACCCTCTTCTCGTTTCCTCACCCCCACCACTCTCTCGAAACCCCAACGTCTTCACCTTAACCGTGCCGCGCCGCCGCAGAAGGATTCGGTTTCGGGTCTCGGCCGCCGCGGAGCCCGATGGGCCGTCGTGGTCGCAATCGCTGCTGCGCGGGTCACGGCGGTTTTGGGGAAAGTTTGGGGAAATGGTAAAGAAGGAGACGGGTCTCGACTTCGAAAACAGGAGTGTGAAGAAAGTTGGCGAGTTTGTGAACGGAGATGAATTGCGAAGGTTGGGGACTGATTGGGTGTTTCGGTTTGTCGATTGGAATCGTTGGGAACGGTGGAAGAATATCAAGGATTGGGAACCTAAGCGAATTGGTGCATTGGTTCTTTACATTTTTGTTGTGACATTTGCTTGTAGAGGAGTATATGTAACAATTCAAGCACCTTTCCTAAGTCGCCAGAAAAAAGAGTTGACAGAAGCTTACATGGAAGCGTTAATTCCTGAACCATCCCCTACCAACATTAAAAGATTTAAAAAGGGTATGTGGAAGAAGACAATGCCGAAAGGCCTGAAAATGAAAAAGCTTATTGAAAGACCTGATGGAACACTTGTTCATGATACTTCTTATGTTGGAGAGGATGCATGGGAGGATGATCGAGAGGCTCCTGAGGAGCGTGTAAAACAAATTATAGAGGATGATGAAAGGTTAAACAAAGAAGAGAAGAAAGAGTTAACAAAAGGCTTGGGCATTTCAGGTGAAGTTCAAACTGATGGCACATGGCGTGATAGACTTAATAAATGGAGAGAGATCCTTAGTAAAGAACGTTTTTCTGAGCAAGTGGATTCCTTAAATGCCAAATATGTAGTTGAATTCGACATGAAAGAGGTTGAAAATAGTCTTCGCAAGGATGTGGCAGAAAAGGTGACACCCACTCAGGGTACAAGGGCTTTGTGGATAGCTAAGAGATGGTGGCGCTATCGCCCTAAACTTCCTTACACTTATTTCCTTGACAAACTCGATAGTTCTGAGGTAGCAGCCGTTGTCTTTACTGAAGACTTGAAAAGATTGTATGTGACGATGAAAGAAGGTTTTCCATTGGAATTTGTTGTTGATATCCCTCTTGATCCGTATATGTTTGAGATTATTACAAGTTCCGGAGTTGAAGTAGATCTCCTTCAGAAGCGACAGATCCATTATTTCATGAAGGTTGTGATTGCATTAGTACCTGGAATACTGATTCTCTGGCTTATAAGGGAGTCTGTAATGCTTCTACACATTACTAACAAGAGGTTTCTTTACAAGAAGTATAATCAACTCTATGATATGGCTCATGCTGAAAATTTCATCATGCCAGTTGGAGATGTTGGTGAAACAAAATCAATGTACAAGGAAGTTGTGTTGGGGGGTGATGTCTGGGATCTTCTTGATGAGTTAATGATCTATATGGGAAATCCTATGCAATTCTATGAAAGGGATGTGCAGTTTGTTCGGGGTGTTCTACTCTCTGGACCTCCAGGAACTGGAAAAACACTTTTTGCCAGGACGCTTGCAAAAGAAAGTGGATTACCTTTTGTATTTGCTTCAGGTGCAGAATTCACTGATAGTGAAAAAAGTGGTGCAGCTAGGATCAATGAGATGTTTTCCATTGCTAGGAGAAATGCACCTTGTTTTGTATTTGTGGATGAAATAGACGCTATTGCTGGAAGACATGCTAGGAAGGATCCACGGAGAAGGGCAACTTTTGAGGCTCTTATTGCACAGCTTGATGGGGAGAAGGAAAAAACTGGTGTAGACCGTGTATCCCTCAGACAAGCTATCATATTTATCTGTGCCACAAATAGGCCAGATGAATTAGATCTTGAGTTTGTTCGTGCTGGACGTATTGATCGTCGTCTGTACATTGGTTTGCCTGATGCAAAGCAGAGAGTTCAAATTTTTGGTGTGCACAGTTCCGGAAAGCAACTTGCAGAGGATGTGGATTTTGACGAGCTTGTCTTCCGTACTGTTGGATTCTCTGGAGCAGATATAAGAAACCTTGTCAACGAATCAGCAATAATGTCGGTGAGAAAAGGGCATTCCAAAATTTTCCAGCAAGATATTATTGATGTACTAGATAAACAACTGCTTGAGGGTATGGGTGTCCTTCTGACAGAGGAAGAGCAACAAAAATGTGAACAAAGGTTATCCTTTGAAAAGAAGAGACTGCTTGCTGTTCATGAAGCTGGTCATGTAGTGCTAGCTCACTTATTTCCTCGGTTTGACTGGCATGCATTTTCACAGCTCCTGCCTGGTGGTAAGGAAACTGCAATATCTGTATTTTATCCTCGAGAAGATATGGTAGACCAAGGCTATACAACATTTGGTTACATGATGATGCAAATGGTAGTAGCTCATGGTGGTCGATGTGCTGAACGTATTATATTTGGTGATGATATAACTGATGGTGGAAGTGATGATCTTGAAAAGATAACGAAGATTGCTAGGGAGATGGTTATCAGTCCCCAAAATAAAAAGTTGGGGTTAATTGCTTTAACAAAAAGGGTTGGCTTAAATGATCGACCAGACAGCCCAGATGGAGAGTTGATAAGATATAGATGGGACGATCCCCAAGTAATTCCTGCTAATATGACACTAGAGGTGTCTGAGCTTTTTACAAGGGAGTTGACAAGGTACATTGAAGAAACGGAAGAACTTGCAATGAATGCTTTAAGGAATAACAGGCACATCCTGGACTTGATTGTGAGGGAACTATTGGAGAGGTCAAGAATAACCGGATTGGAGGTTGAAGAAAAATTAAAGGAAATGTCTCCAGTAATGTTCGAGGACTTTGTGAAGCCATTCCAGATAAATCCAGATGAGAAGGGACCATTACCGCATAATGATCGGCTACGATATCAGTTACCCGACTTGTATCCTGCTCCTCTCCATAGATGTTGA 2949 0.4266 MELTIPRNPNPLLVSSPPPLSRNPNVFTLTVPRRRRRIRFRVSAAAEPDGPSWSQSLLRGSRRFWGKFGEMVKKETGLDFENRSVKKVGEFVNGDELRRLGTDWVFRFVDWNRWERWKNIKDWEPKRIGALVLYIFVVTFACRGVYVTIQAPFLSRQKKELTEAYMEALIPEPSPTNIKRFKKGMWKKTMPKGLKMKKLIERPDGTLVHDTSYVGEDAWEDDREAPEERVKQIIEDDERLNKEEKKELTKGLGISGEVQTDGTWRDRLNKWREILSKERFSEQVDSLNAKYVVEFDMKEVENSLRKDVAEKVTPTQGTRALWIAKRWWRYRPKLPYTYFLDKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEFVVDIPLDPYMFEIITSSGVEVDLLQKRQIHYFMKVVIALVPGILILWLIRESVMLLHITNKRFLYKKYNQLYDMAHAENFIMPVGDVGETKSMYKEVVLGGDVWDLLDELMIYMGNPMQFYERDVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAARINEMFSIARRNAPCFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGVDRVSLRQAIIFICATNRPDELDLEFVRAGRIDRRLYIGLPDAKQRVQIFGVHSSGKQLAEDVDFDELVFRTVGFSGADIRNLVNESAIMSVRKGHSKIFQQDIIDVLDKQLLEGMGVLLTEEEQQKCEQRLSFEKKRLLAVHEAGHVVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDMVDQGYTTFGYMMMQMVVAHGGRCAERIIFGDDITDGGSDDLEKITKIAREMVISPQNKKLGLIALTKRVGLNDRPDSPDGELIRYRWDDPQVIPANMTLEVSELFTRELTRYIEETEELAMNALRNNRHILDLIVRELLERSRITGLEVEEKLKEMSPVMFEDFVKPFQINPDEKGPLPHNDRLRYQLPDLYPAPLHRC* 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1968 982 PANTHER ATP-DEPENDENT PROTEASE 33 982 - -
Gso8g1968 982 Gene3D - 642 715 - -
Gso8g1968 982 CDD AAA 501 640 - -
Gso8g1968 982 Gene3D Peptidase M41 725 941 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Gso8g1968 982 Gene3D - 460 641 IPR027417 -
Gso8g1968 982 SMART AAA_5 499 642 IPR003593 -
Gso8g1968 982 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 465 710 IPR027417 -
Gso8g1968 982 SUPERFAMILY FtsH protease domain-like 733 946 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Gso8g1968 982 Pfam AAA+ lid domain 662 703 IPR041569 -
Gso8g1968 982 Pfam ATPase family associated with various cellular activities (AAA) 503 639 IPR003959 GO:0005524|GO:0016887
Gso8g1968 982 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 12, CHLOROPLASTIC 33 982 - -
Gso8g1968 982 Pfam Peptidase family M41 732 933 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1968 Gso-Chr8 20208550 20279098 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1968 8 20208550 20279098 Gso8g1968 8 20208550 20279098 ECH