Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1965 ATGACTTGCAGCGAACAAGAGAAACCTCACCATGTCTTGCTTTTTCTCATCTATATGTGGTTGTGGTGGAGTACTACTTGTATCCACGTTGAAGCCAATGATAGTTTGAAGCCAGGTGATACTCTGAATGCCACGGTACCAGGGGCAGAGCTATGTTCAAAAAAGGGTAAATATTGCATGAGTTTCGACCCAATAACTCATGATAATCAGGAAGCAGTTTACTTGACTATATGTGCCCAAAAGAAAGATGATTGGGAAGTGTGGGTTGCAAATAGAAACCAACCTGTTGACTCAAATTCTGCTGTTCTATCATTGGATCACAAAGGGGTACTCAAAATAGAATCCCAAGATGGTAAGAAAAAAGTGAAGAAATCACCAATAATCCTTTATTCACCACCTCAACCTATCAATAACACACTGGCCACTTTGTTGGACACAGGCAACTTTGTGCTTCAACAACTTCATCCCAATGGGTCCAAAATAAGAGTCTTGTGGGAAAGCTTTGATTTTCCCACAGACACATTGCTCCCTGGGATGAAGTTAGGTTTGAATCACAAAACTGGTGGTACTAATTGGTCACTTGTTTCATGGCTAAGCGGCCAAGTCCCTACTGCTGGTCCATTCAAGCTCGAATGGGAACCGAAAACAAGAGAGTTGTTGATCATCAAGCGCGGCGGCAGCAGCAGCAGCGGCGGCAAGCGGGTTTTGTGGGCTAGCGGGAACAAATTGGAGCACATTCCGAGCGAGATTCGGCGCGAGATTGTGCCAAGCGAAACCGGAGACTACTTCACGTTGAAAAGTTCTGATTCGGAGGAAGAGCCCACGAAGTGGACACTGTTGTCAACTGGGCAACTGATAAACCGCAAAGGCGTGGATGTGGCGAGGGCTGATATGTGTCACGGATACAACACAGATGGAGGGTGCCAGAAATGGGATGCGATATTACCCTCTTGCAGGCGTCCTGGTGATGCATTTGAACTCAAATATGGGTACCCTAAATGGGACACGGAAGTGAAGAGAGACGAAGAAAATTCGAGTTATGGCATAAGTGATTGCCAGGAAATTTGCTGGAGAAACTGCAGCTGCGTTGGATTTGCTCTTAATCATCGTAATGAAACTGGCTGCGTCTTCTTTCTGTGGGATTTGGTGAAGGGTACCAATATTGCAAACGAGGGTTACAAATTTTATGTGCTTGTAAGGAGCAACCATCAAAACCGTATAAAACAGTGGATATGGGCAATGGTTGCAACAGTAGCAACCATACTCATAATCTGCCTTTGCATTCTGCGCAGAGTCTTAAAGAAACGAAAACATGTGCTTAAAGAAAATAAAAGAAATGGAATGGAGATTGAGAATCAGGATCTTGCAGCTTCCGGTAGATCCTCTAGTACCGACAAACTAGAAGTTTATTTAAAGGAGGAACATGACTTGAAATTATTTAGTTATGCATCGATAATAGAGGCTACAAATGACTTTTCGTCTGAAAACAAGTTAGGACAGGGAGGCTTTGGAGTAGTTTATAAGGGAATTCTATCTACAAGGCAAGAAGTTGCTGTGAAAAAACTTTCAAGATCTTCTGGGCAAGGACTTATTGAGTTTAAAAATGAATTAACACTCATATCTAAACTCCAACATACAAATTTGGTTCAGCTACTCGGTTACTGCATTCATGAAGAAGAGCGGATTTTGATCTACGAGTATATGTCCAACAAAAGCTTGGACTTCATTTTATTTGATTCTACTCAAAGTCACTTGCTGGATTGGAATAAGCGTTTTAACATAATAGAAGGAATTGCTCAAGGATTACTATACCTTCACAAATACTCAAGACTTAGAATCATTCACAGAGACTTGAAGGCTAGCAACATACTCCTTGATGAGAATATGAACCCCAAAATATCCGATTTCGGAATAGCAAAAATGTTCACACAACAGGATTCTGAAGCAAATACCACCAGAATTTTTGGAACATATGGTTACATGTCTCCAGAGTATGCTATGGAAGGAATTTTCTCTACAAAATCTGATGTATACAGCTTTGGAGTGTTACTCTTTGAAATTGTTAGTGGTAAAAGAAACAATAGCTTCTACACTGAAGAACGACAACTCAATCTAGTAGGACATGCATGGGAGCTATGGAAAAAAGGTGAGGCTCTTAAGTTGGTGGATCCAGCACTGAATAATGATTCATTTTCAGAGGATGAAGTGCTAAGATGTGTTCATGCTGGTCTATTATGTGTGGAAGAAAATGCAGATGATCGTCCCTCCATGTCCAACATTGTATCTATGTTATCAAACAAAAGTAAAGTTACCAATTTGCCTAAAAAACCAGCATATTATGTTAGAACAAAACTCCTTGGGGAAGAACTAGAAACGTCTACTAAAGAATATGGTTTAGATTTCTTATTCGAAAATTCCCTTTATGTATGTTCAGTTTGA 2439 0.4071 MTCSEQEKPHHVLLFLIYMWLWWSTTCIHVEANDSLKPGDTLNATVPGAELCSKKGKYCMSFDPITHDNQEAVYLTICAQKKDDWEVWVANRNQPVDSNSAVLSLDHKGVLKIESQDGKKKVKKSPIILYSPPQPINNTLATLLDTGNFVLQQLHPNGSKIRVLWESFDFPTDTLLPGMKLGLNHKTGGTNWSLVSWLSGQVPTAGPFKLEWEPKTRELLIIKRGGSSSSGGKRVLWASGNKLEHIPSEIRREIVPSETGDYFTLKSSDSEEEPTKWTLLSTGQLINRKGVDVARADMCHGYNTDGGCQKWDAILPSCRRPGDAFELKYGYPKWDTEVKRDEENSSYGISDCQEICWRNCSCVGFALNHRNETGCVFFLWDLVKGTNIANEGYKFYVLVRSNHQNRIKQWIWAMVATVATILIICLCILRRVLKKRKHVLKENKRNGMEIENQDLAASGRSSSTDKLEVYLKEEHDLKLFSYASIIEATNDFSSENKLGQGGFGVVYKGILSTRQEVAVKKLSRSSGQGLIEFKNELTLISKLQHTNLVQLLGYCIHEEERILIYEYMSNKSLDFILFDSTQSHLLDWNKRFNIIEGIAQGLLYLHKYSRLRIIHRDLKASNILLDENMNPKISDFGIAKMFTQQDSEANTTRIFGTYGYMSPEYAMEGIFSTKSDVYSFGVLLFEIVSGKRNNSFYTEERQLNLVGHAWELWKKGEALKLVDPALNNDSFSEDEVLRCVHAGLLCVEENADDRPSMSNIVSMLSNKSKVTNLPKKPAYYVRTKLLGEELETSTKEYGLDFLFENSLYVCSV* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1965 812 Pfam PAN-like domain 344 383 IPR003609 -
Gso8g1965 812 ProSiteProfiles Bulb-type lectin domain profile. 33 164 IPR001480 -
Gso8g1965 812 SMART blect_4 33 171 IPR001480 -
Gso8g1965 812 PIRSF SRK 294 808 IPR024171 GO:0004674
Gso8g1965 812 PIRSF SRK 5 294 IPR024171 GO:0004674
Gso8g1965 812 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 810 - -
Gso8g1965 812 SUPERFAMILY Protein kinase-like (PK-like) 472 764 IPR011009 -
Gso8g1965 812 Gene3D - 28 168 IPR036426 -
Gso8g1965 812 Pfam D-mannose binding lectin 87 197 IPR001480 -
Gso8g1965 812 SMART serkin_6 492 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1965 812 Gene3D Phosphorylase Kinase; domain 1 452 567 - -
Gso8g1965 812 Gene3D Transferase(Phosphotransferase) domain 1 568 779 - -
Gso8g1965 812 ProSitePatterns Protein kinases ATP-binding region signature. 498 521 IPR017441 GO:0005524
Gso8g1965 812 CDD STKc_IRAK 498 764 - -
Gso8g1965 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 199 IPR036426 -
Gso8g1965 812 ProSiteProfiles PAN/Apple domain profile. 318 400 IPR003609 -
Gso8g1965 812 ProSiteProfiles Protein kinase domain profile. 492 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1965 812 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 12 810 - -
Gso8g1965 812 Pfam Protein tyrosine and serine/threonine kinase 495 764 IPR001245 GO:0004672|GO:0006468
Gso8g1965 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1965 Gso-Chr8 20108694 20114410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1965 460 797 Receptor kinase-like Gene Family AT4G11530 54.519 6.18e-120 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso8g1965 PK_Tyr_Ser-Thr 5.4e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1790 15 34765627 34768943 Gso8g1965 8 20108694 20114410 GST