Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1948 ATGTCTACGTCCGACGCTGGAGGTGCTGGATCCAATGATTCCAATGCTACCAGGAGACAAAGCAAGAGACCCAAGTACTCAAAGTTTACTCAACAAGAACTTCCAGCATGCAAACCTATTCTCACACCAAGAGCGGTTATTTCAGCATTCTTGATTGTCACCATTGTGTTCATTCCCATTGGAGTTGCTTCATTAATTGCTTCGCATGATGTTGTTGAAATTATTGATAGGTACGACTCACACTGCATACCATCAAATGTGACAGACAAGGTGGCATACATTCAGACTCCTGGAGAAAAGCCATGCAACAGGCAGCTAACTGTGGAAAAGCGTATGAAATCTCCTATCTATGTTTATTACCAGCTTGACAACTTTTACCAGAATCATCGACGGTATGTTAAAAGCCGAAATGATGATCAGCTGAGGGATTCTGGAAAAGCAAGCTCAGTAAGTGGTTGTGAACCTGAAAATAATGTAAATGGAATGGCAATTTTACCTTGCGGTCTTATAGCTTGGAGCTTGTTCAATGATACGTACAGCTTCTCACGCAACAGCAATAATTTAACAGTGAACAAGACAGGCATCTCATGGAAGAGTGACAGGGACCACAAATTTGGAAGTGATGTTTTTCCTAAAAATTTCCAAAATGGTCCTATAATAGGTGGTGGTGGCCTCGATGAAAATGTACCTTTGAGTCAGCATGAGGATCTTATTGTTTGGATGCGAACTGCTGCTTTGCCAACTTTTAGGAAGTTGTATGGAAAGATTGAGGTGGATCTAGAGAAAGGCGATGTCATAAACGTGAATTTGCATAACAACTACAACACATACAGTTTTAATGGCAAGAAGAAGCTTGTTCTGTCAACTACTAGCTGGCTCGGTGGAAAGAATGACTTCCTTGGCATTGCTTATCTCACTGTTGGAGGACTGAGCTTCTTTTTGTCAATGGCCTTTACCGTTGTATATCTTGTCAAGCCAAGGCAACTTGGAGATCCCTCTTATTTGTCATGGAATAGGAGCCCCGGAGGGCACTGA 1035 0.4203 MSTSDAGGAGSNDSNATRRQSKRPKYSKFTQQELPACKPILTPRAVISAFLIVTIVFIPIGVASLIASHDVVEIIDRYDSHCIPSNVTDKVAYIQTPGEKPCNRQLTVEKRMKSPIYVYYQLDNFYQNHRRYVKSRNDDQLRDSGKASSVSGCEPENNVNGMAILPCGLIAWSLFNDTYSFSRNSNNLTVNKTGISWKSDRDHKFGSDVFPKNFQNGPIIGGGGLDENVPLSQHEDLIVWMRTAALPTFRKLYGKIEVDLEKGDVINVNLHNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLSFFLSMAFTVVYLVKPRQLGDPSYLSWNRSPGGH* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1948 344 PANTHER ALA-INTERACTING SUBUNIT 3 2 343 - -
Gso8g1948 344 PANTHER CELL CYCLE CONTROL PROTEIN 50 2 343 IPR005045 GO:0016020
Gso8g1948 344 MobiDBLite consensus disorder prediction 1 17 - -
Gso8g1948 344 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 65 328 IPR005045 GO:0016020
Gso8g1948 344 PIRSF Lem3/Cdc50 1 340 IPR005045 GO:0016020
Gso8g1948 344 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1948 Gso-Chr8 19683171 19690055 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1948 8 19683171 19690055 Gso8g1948 8 19683171 19690055 ECH
Gso8g1357 8 12985754 12990317 Gso8g1948 8 19683171 19690055 PCT
Gso15g2167 15 49806253 49814575 Gso8g1948 8 19683171 19690055 PCT
Gso8g1948 8 19683171 19690055 Gso8g1357 8 12985754 12990317 PCT
Gso8g1948 8 19683171 19690055 Gso15g2167 15 49806253 49814575 PCT