Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1938 ATGTGCAGTTCCATGACCAAGGTGACTGTAGGCATAGAAGCAGCCACAGCTACCTCTCTGGTAGCCAGAATCAACGGCCGGCCGGTCCTTCAACCGACTTGTAACCGATTTCCTAACCTTGAGAGGAGAAATTCAATCAAGAAACTGTCACCAAAATCACCATGTCCTCCATCACCACCACTTCCAAGCAAAACCCCATTGGCACCTCTAGTTTCTCCAAAGTCTAAGTCCCCAAGGCCTCCACCTATAAAGAGAGGCAATGAGAGTACTGGACTTAACTCAAGTTCTGAAAAGATTGTGACACCAAGAAACACCATAAAAACTCCAACTCTAGAGAGGAAAAAGTCCAAGAGTTTTAAGGAAAGGTCATATGATGCTTTAGGCCTTTCTGCCTCCACAGAGGCATCATTAAGTTACTCTTCCAATTTGATCACTGAATCCCCTGGGAGCATAGCTGCAGTGAGGAGAGAACAGATGGCACTGCAGCATGCGCAGAGAAAAATGAAGATTGCTCATTATGGAAGATCAAAGTCTGCAAAGTTTGAAAGAGTTGTTCCTCTTGATCCTTCATCCAATCTTACTTCAAAGACAAGTGAGGAGGAGAAGAGATGCAGCTTTATCACAGCCAATTCAGATCCCATCTATATTGCTTATCATGATGAAGAATGGGGAGTTCCAGTTCATGATGACAAGATGTTGTTTGAACTTCTAGTTTTAAGTGGTGCTCAAGTAGGATCAGATTGGACCTCAATCTTGAAGAAACGCCAGGATTTCAGGGCTGCATTTTCTGAATTTGATGTAGCAACTTTGGCCAACTTGACTGATAAGCAAATGGTGTCGATTAGTTTGGAATATGGGATTGATATAAGCCAAGTTCGAGGTGTTGTTGACAATGCTAACCGAATTTTAGAGATTAACAAGGACTTTGGTTCATTTGATAAATACATTTGGGGTTTTGTCAATCACAAACCCATCTCCACTCAATACAAGTTCGGCCACAAGATCCCAGTTAAGACATCAAAGTCAGAGAGCATAAGCAAAGACATGATCAGAAGGGGGTTTAGGTGTGTAGGTCCCACAGTGCTTCATTCATTTATGCAAGCAGCTGGACTCACCAATGACCACTTAATCACTTGCCACAGACACTTGCAATGCACCTTATTGGCATCTAGCCCCCATTGCACCACAGAGCACTCTCTATAG 1203 0.4323 MCSSMTKVTVGIEAATATSLVARINGRPVLQPTCNRFPNLERRNSIKKLSPKSPCPPSPPLPSKTPLAPLVSPKSKSPRPPPIKRGNESTGLNSSSEKIVTPRNTIKTPTLERKKSKSFKERSYDALGLSASTEASLSYSSNLITESPGSIAAVRREQMALQHAQRKMKIAHYGRSKSAKFERVVPLDPSSNLTSKTSEEEKRCSFITANSDPIYIAYHDEEWGVPVHDDKMLFELLVLSGAQVGSDWTSILKKRQDFRAAFSEFDVATLANLTDKQMVSISLEYGIDISQVRGVVDNANRILEINKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMIRRGFRCVGPTVLHSFMQAAGLTNDHLITCHRHLQCTLLASSPHCTTEHSL* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1938 400 PANTHER OS04G0501200 PROTEIN 1 400 - -
Gso8g1938 400 MobiDBLite consensus disorder prediction 87 107 - -
Gso8g1938 400 MobiDBLite consensus disorder prediction 52 80 - -
Gso8g1938 400 Gene3D Hypothetical protein; domain 2 201 383 - -
Gso8g1938 400 SUPERFAMILY DNA-glycosylase 202 385 IPR011257 GO:0003824|GO:0006281
Gso8g1938 400 MobiDBLite consensus disorder prediction 108 122 - -
Gso8g1938 400 Pfam Methyladenine glycosylase 209 382 IPR005019 GO:0006284|GO:0008725
Gso8g1938 400 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE I 1 400 - -
Gso8g1938 400 MobiDBLite consensus disorder prediction 41 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1938 Gso-Chr8 19356754 19360255 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1823 15 36716822 36720414 Gso8g1938 8 19356754 19360255 GST
Gso8g1346 8 12794599 12797704 Gso8g1938 8 19356754 19360255 PCT
Gso15g2180 15 50079240 50082389 Gso8g1938 8 19356754 19360255 PCT
Gso8g1938 8 19356754 19360255 Gso8g1346 8 12794599 12797704 PCT
Gso8g1938 8 19356754 19360255 Gso15g2180 15 50079240 50082389 PCT