Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1933 ATGTTGCATAGGAGAAGAAACAAAAAAAAGAGGGGTTTCGTTAGAGAGAACAAAAAAATGAAGTACGTGTTGGTGACAGGTGGAGTTGTGAGTGGACTTGGGAAAGGAGTCACTGCAAGCAGTATTGGAGTGCTCCTTCAGGCTTGCGGCTTTCGGGTTACTTCTATCAAGATTGATCCCTATCTGAACACTGATGCAGGGACAATGTCCCCTTTTGAGCATGGGGAAGTGTTTGTTTTAGATGATGGCGGTGAGGTTGACCTTGATCTTGGAAACTATGAACGTTTCTTGGACCTCAAATTAACTTGTGACAATAATATCACAACTGGGAAAATATATCAGTCTGTTATTGAAAAGGAGAGAAGAGGAGATTATCTTGGCAAGACTGTGCAGGTTGTTCCACACATTACTGATGCCATCCAAGAATGGATAGAGTGTGTGGCACAGATACCAGTTGATGGAAAAGAAGGCCCAGCTGATGTTTGTGTTATTGAGTTGGGTGGAACTATTGGAGATATTGAGTCTATGCCTTTTATTGAAGCACTTGGCCAATTTTCATACCGTGTAGGCCCTGGCAACTTCTGTTTAGTTCATGTCAGCCTGGTGCCTGTTCTCAATGTTGTTGGTGAACAGAAAACAAAGCCAACTCAACACAGTGTCCGCCAACTTAGAGGGTTAGGGTTGACCCCAAATCTTCTTGCTTGTCGCAGTTCAAAGGAACTTGATGACAATGTTAAGGAAAAACTTTCTCAATTTTGTCATGTTCCGTCATCAAGCATACTAACTCTCTATGATGTTCCAAATATTTGGCACATTCCTTTGCTATTAAGAGACCAAAAGGCGCATGAGGCAATCCTGAAAACATTAAACCTGCGAGGTGTTGCTACAGAGCCTAATTTTAAGGAGTGGATTGCGACAACAAAAGTATATGACAAATTTCATGAAATGGTTAGAATTGCAATGGTGGGAAAATATACTAACCTCTCAGATGCATATCTTTCTGTACTGAAGGCACTTTTGCATGCTTCTACTGCTTGCAATCATAAGCTTGTTGTGGATTTGGTTCCCGCTGAACATCTCGAAGATGATACCTCTAAAGAGGATCCTGATGCATATAAAGCTGCTTGGGGTCTTTTGAAGGGTGCTAATGGGATTCTAGTTCCAGGAGGTTTTGGTGACAGAGGAGTGGAAGGAAAAATTCTTGCTGCCAAGTATGCTCGAGAAAATAACATTCCATATCTGGGCATTTGCTTGGGGATGCAAATTGCTGTCATTGAGTTTTCAAGATCTGTTCTGGGTCTTCATGATGCTAATAGCACAGAATTTGATCCCAAAACCGAAAACCCTTGTGTCATATTTATGCCAGAAGGTTCAAAGACTCATATGGGGGGAACTATGCGTCTTGGTTCAAGGAGAACTTACTTTCATGTTGCTGACTGCAAATCGGCCAAGTTGTATGGTAATGCAAGCTTTGTTGATGAGCGACATCGGCATAGATACGAGGTTAATCCTGATATGATATCACAACTTGAGAGTGCTGGTCTATCTTTTGTTGGCAAAGATGAAACTGGGAAGCGCATGGAGATAGTTGAATGTCCCAGTCATCCTTTCTTCATTGGTGCTCAGTTTCATCCTGAGTTCAAGTCCAGACCAGGGAAACCTTCTCCATTATTCTTAGGATTAATATCAGCAGCATGTGAGAGGACAATTGTGCCTGCAAGCAATGGCTATAGCAAGTTAACAAATGGGATACACTCACCATTGTTGAAAGCAGCAGCAGCACATAATGGAAATAATGGGTTCAAATCTTCCAATAGTTCCTTAAATGGTGTATATACAAGTACAACTACCAATGGGGTGTGTTGA 1866 0.4175 MLHRRRNKKKRGFVRENKKMKYVLVTGGVVSGLGKGVTASSIGVLLQACGFRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDLKLTCDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQEWIECVAQIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLVHVSLVPVLNVVGEQKTKPTQHSVRQLRGLGLTPNLLACRSSKELDDNVKEKLSQFCHVPSSSILTLYDVPNIWHIPLLLRDQKAHEAILKTLNLRGVATEPNFKEWIATTKVYDKFHEMVRIAMVGKYTNLSDAYLSVLKALLHASTACNHKLVVDLVPAEHLEDDTSKEDPDAYKAAWGLLKGANGILVPGGFGDRGVEGKILAAKYARENNIPYLGICLGMQIAVIEFSRSVLGLHDANSTEFDPKTENPCVIFMPEGSKTHMGGTMRLGSRRTYFHVADCKSAKLYGNASFVDERHRHRYEVNPDMISQLESAGLSFVGKDETGKRMEIVECPSHPFFIGAQFHPEFKSRPGKPSPLFLGLISAACERTIVPASNGYSKLTNGIHSPLLKAAAAHNGNNGFKSSNSSLNGVYTSTTTNGVC* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1933 621 PANTHER CTP SYNTHASE 20 592 - -
Gso8g1933 621 SUPERFAMILY Class I glutamine amidotransferase-like 317 568 IPR029062 -
Gso8g1933 621 Hamap CTP synthase [pyrG]. 20 569 IPR004468 GO:0003883|GO:0006221
Gso8g1933 621 Gene3D - 12 311 IPR027417 -
Gso8g1933 621 TIGRFAM PyrG: CTP synthase 19 564 IPR004468 GO:0003883|GO:0006221
Gso8g1933 621 PANTHER CTP SYNTHASE 20 592 IPR004468 GO:0003883|GO:0006221
Gso8g1933 621 CDD GATase1_CTP_Synthase 317 562 IPR033828 GO:0003883|GO:0006241
Gso8g1933 621 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 318 571 - -
Gso8g1933 621 Pfam Glutamine amidotransferase class-I 328 563 IPR017926 -
Gso8g1933 621 Gene3D - 314 574 IPR029062 -
Gso8g1933 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 291 IPR027417 -
Gso8g1933 621 CDD CTPS_N 21 287 IPR017456 GO:0003883|GO:0006221
Gso8g1933 621 Pfam CTP synthase N-terminus 21 291 IPR017456 GO:0003883|GO:0006221
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1933 Gso-Chr8 19281260 19288735 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1933 8 19281260 19288735 Gso8g1933 8 19281260 19288735 ECH
Gso15g1827 15 37201225 37209219 Gso8g1933 8 19281260 19288735 GST
Gso8g1261 8 11669594 11676942 Gso8g1933 8 19281260 19288735 PCT
Gso8g1933 8 19281260 19288735 Gso8g1334 8 12554834 12561628 PCT
Gso8g1933 8 19281260 19288735 Gso15g2192 15 50430996 50437663 PCT