Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1932 ATGTGCTTCCTCAACACAAAGTCCCTGGCTCACTTCATGTTGCTAACAACAATTGTAGTTGGCATTGCAATGGGAGATTCATCAAAGGACAAAGAGGAATGCACTGAGCAATTGGCAGGCCTAGCAACATGTCTGCCCTATGTTGGGGGTCAAGCACAAGCTCCAACCCCAGATTGTTGTAGTGGTCTCAAGCAAGTGCTCAAGAACAACAAAAAGTGTTTGTGTGTTATTATCAAAGATCGCAATGATCCTGATCTGGGTGGTTTACAGATTAATGTTACGTTGGCTTTGAACCTGCCCACAGCTTGCAATTCCCCTGTCAATGTCTCCAAGTGTCCAGAACTGCTGCACATGGATCCAAAATCAGCAGAGGCTCAAGTTTTTTATCAATTGGAGAAAGGACCCAGCAAAAATGGCACAGGCCCTGCACCAAGTCCTTCTGCTGCAGTCGGAGCAAGTCCTTCAAGTAACCAGAAAGCCAATACCCCACAGAAGAATGATGCATTCTGCAAAGAGAAGAGATTATTTGGGTTAGAGATTTTGGCTATAGGGCTCCAAATTTGGGCTTCAGTTGGGCTTCTTTGCTAA 588 0.4524 MCFLNTKSLAHFMLLTTIVVGIAMGDSSKDKEECTEQLAGLATCLPYVGGQAQAPTPDCCSGLKQVLKNNKKCLCVIIKDRNDPDLGGLQINVTLALNLPTACNSPVNVSKCPELLHMDPKSAEAQVFYQLEKGPSKNGTGPAPSPSAAVGASPSSNQKANTPQKNDAFCKEKRLFGLEILAIGLQIWASVGLLC* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1932 195 PANTHER PROTEIN YLS3 12 188 - -
Gso8g1932 195 Gene3D - 31 112 IPR036312 -
Gso8g1932 195 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 113 IPR036312 -
Gso8g1932 195 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 12 188 IPR043325 -
Gso8g1932 195 CDD AAI_LTSS 41 104 - -
Gso8g1932 195 Pfam Probable lipid transfer 17 112 IPR016140 -
Gso8g1932 195 MobiDBLite consensus disorder prediction 149 165 - -
Gso8g1932 195 SMART aai_6 34 112 IPR016140 -
Gso8g1932 195 MobiDBLite consensus disorder prediction 133 165 - -
Gso8g1932 195 PRINTS Plant phospholipid transfer protein signature 33 49 IPR000528 GO:0006869|GO:0008289
Gso8g1932 195 PRINTS Plant phospholipid transfer protein signature 54 68 IPR000528 GO:0006869|GO:0008289
Gso8g1932 195 PRINTS Plant phospholipid transfer protein signature 90 107 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1932 Gso-Chr8 19221061 19222519 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1932 26 181 Acyl Lipid Metabolism Gene Families AT2G44300 57.831 3.35e-62 190