Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1917 ATGGTTTTTAGTGAGGAAACTGCTGGGATTTTTGACATAAAATGGAGTCCAGCTGGAGGGCATGCAAGTCCTTTTCTAGCTCAAGCAGATGCTGATGGATACTTGAGGATTAAAATACTGGGGGGTTGCTGTAATGGAGTGGAAGGGGCTAATCTAAAGGAGATCACAAATGGAAAAATCAGTAACTCTATGTGCCTGTACCTGGATTGGAATCCTTCAGCTACATCCATCACAGTAGGGCTTTCTGACGGCTCTGTGTCGATTGTTTCTCTTCTTGAATCCAAGCTAGAAATACAAGATGAGTGGAAGGCACATGATTTTGAACTTTGGACAACCTCCTTTGACATCCACCAACCAAATTTGGTATACACCGGCTCTGATGATTGTAAATTCAGTTGCTGGGATTTGCGAGATAAACCTCCCAATGTGGTATTTCAGAGCTCTGAAGTCCACAAAATGGGTGTTTGTTGCATTGAGAAGAGTCCACATGACCCAAATACCTTGTTAACTGGCAGCTATGATGAATACCTAAGGGTATGGGATTTAAGATCAATGTCAAAACCCCTTAATAAGACTTCAATTAACTTGGGGGGAGGAGTTTGGAGGGTTAAGCACCACCCCTTCATTCCAGGTTTGGTTTTGGCTGCTTGTATGCACAATGGTTTTGCTATTGTCGCCATTAAAGGCAACAATGCTGAAGTGTCGGAAACTTACAAGAAGCATGATTCTCTTGCCTATGGAGCAGACTGGCAGAAAGGAGAAGCAAATCACATAGGTGGGAATACCAAACCTCTAGTGGCTACTTGCTCATTCTATGACAAACTTGTTCGGGTGTGGAGGCCAGGAAATGATATTGTCTTGTAG 864 0.4317 MVFSEETAGIFDIKWSPAGGHASPFLAQADADGYLRIKILGGCCNGVEGANLKEITNGKISNSMCLYLDWNPSATSITVGLSDGSVSIVSLLESKLEIQDEWKAHDFELWTTSFDIHQPNLVYTGSDDCKFSCWDLRDKPPNVVFQSSEVHKMGVCCIEKSPHDPNTLLTGSYDEYLRVWDLRSMSKPLNKTSINLGGGVWRVKHHPFIPGLVLAACMHNGFAIVAIKGNNAEVSETYKKHDSLAYGADWQKGEANHIGGNTKPLVATCSFYDKLVRVWRPGNDIVL* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1917 287 SUPERFAMILY WD40 repeat-like 5 281 IPR036322 GO:0005515
Gso8g1917 287 SMART WD40_4 141 181 IPR001680 GO:0005515
Gso8g1917 287 SMART WD40_4 231 280 IPR001680 GO:0005515
Gso8g1917 287 SMART WD40_4 51 90 IPR001680 GO:0005515
Gso8g1917 287 SMART WD40_4 95 135 IPR001680 GO:0005515
Gso8g1917 287 PANTHER DIPHTHINE METHYLTRANSFERASE 6 283 - -
Gso8g1917 287 Gene3D - 45 286 IPR015943 GO:0005515
Gso8g1917 287 Pfam WD domain, G-beta repeat 151 181 IPR001680 GO:0005515
Gso8g1917 287 ProSitePatterns Trp-Asp (WD) repeats signature. 168 182 IPR019775 -
Gso8g1917 287 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 148 184 - -
Gso8g1917 287 ProSiteProfiles Trp-Asp (WD) repeats profile. 148 190 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1917 Gso-Chr8 19000428 19004446 Wgd