Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1908 ATGAACGCACCCATCATTGACCCCTTACAGGGAGATTTTCCAGAAGTGATAGAGGAGTATTTGGAACATGGGTGTATGAAATGTATTGCCTTTAATCGTCGTGGTACACTTCTTGCTGCTGGGTGCAACAACGGAAGTTGCGTTATCTGGGATTTTGAAACCCGGGGCATTGCTAAAGAGCTACGAGATAATGAATGTTCATCTCCAATAACCAGTGTCTGTTGGTCAAAGTGTGGTCATCGAATTCTTGTATCTGCTGCTGACAAGTCATTGTTGCTGTGGGATGTTATGAGTGGTAAGAGGATAACAAGAATAGTTTTACAACAAACCCCTCTACAAGCTCGTCTTCATCCGGGTTCCTCTAAACCATCTCTTTGCTTGGCATGCCCTCTCTCATGTCCTCCAATGATTGTTGACTTGAACACAGGAAACACAACTTCGCTTAAAGTTTCTATCTTGGAGATATCCAATAATGGACCAACCCCTACCTCACGTAACAAGTGTGCCGATGGAATTACCTCCTTCTCACCAACTGCTGCATGTTTTAGTAAGTACGGAAACCTGGTTTATGTGGGAAATTCTAAAGGGGAAATTCTTGTAATTAACTATGTAGATGGTGAGGTGCGTGCCATGGTTCCTATACCTGGTGGTTCTGTGGTGAAGAACATTGTGTTTAGCAGGAACGGACAATATCTTCTAACAAACTCAAATGATCGAATAATCAGGATCTATGAAAATCTTCTACCCCTAAAAGAAGAAGTTAGAACACTTGATGAGCTAAATGGGAACCTCAATGATCTAAATGATGTTGAGAAGTTGAAAGCTGTAGGCTCAAAATGCCTAACTTTGTTCCGGGAGTTTCAAGATTCAATAACGAAGGTGCACTGGAAAGCACCCTGCTTCAGTGGTGACGGTGAGTGGGTTGTGGGTGGTTCTGCTAATAAAGGGGAGCACAAGATTTACGTATGGGATAGAGTTGGGCATCTTGTGAAGATCCTTGAAGGACCTAAGGAAGCCCTTATTGATTTAGCATGGCATCCTGTACGTCCTATTGTTGTATCTGTTTCTTTGAATGGCATAGTTTATATCTGGGCTAAGGATTACACCGAGAACTGGAGTGCATTTGCTCCTGATTTCAAAGAGCTCGAGGAAAATGAGGAGTATGTGGAGCGAGAAGATGAATTTGATTTGATTCCCGAGACTGAGAAGGTAAAAGGATCTGATGTTAATGAAGATGACGAAATTGACATTGTAACGGTGGAGAAAGATCCTGCTTTCAGTGACTCTGATATGTCTGAAGAAGAGTTATGTTTCCTGCCAGCAACTCCCAGTTGTGATGCTCCTGAACAGCCAGACAAGTTCGTAAATAGTTCTTCAAAGTTGGTGGACAGCAATAACTCTGGATCCCCACTTTCAGAAGAGGCTGGACCAAATGAAAATACCATGAATCATAACTCAAGTCCAGTGGAAGATGATGCTGGGGGGACACGTATCAAAAGAAAGTGGAAACCTTCAGAGAAGGTGTTGGAGTTGCAGGCAGAAAAAATGAAGAAACCCACAAAATCTGGCAAATCATCAAAATCCAAAAGTAAATATTTGGTTGATGAGGATGATGGTATTGGTTTTTATGGTGATGATCTTTCTGATGGATAA 1653 0.4204 MNAPIIDPLQGDFPEVIEEYLEHGCMKCIAFNRRGTLLAAGCNNGSCVIWDFETRGIAKELRDNECSSPITSVCWSKCGHRILVSAADKSLLLWDVMSGKRITRIVLQQTPLQARLHPGSSKPSLCLACPLSCPPMIVDLNTGNTTSLKVSILEISNNGPTPTSRNKCADGITSFSPTAACFSKYGNLVYVGNSKGEILVINYVDGEVRAMVPIPGGSVVKNIVFSRNGQYLLTNSNDRIIRIYENLLPLKEEVRTLDELNGNLNDLNDVEKLKAVGSKCLTLFREFQDSITKVHWKAPCFSGDGEWVVGGSANKGEHKIYVWDRVGHLVKILEGPKEALIDLAWHPVRPIVVSVSLNGIVYIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLIPETEKVKGSDVNEDDEIDIVTVEKDPAFSDSDMSEEELCFLPATPSCDAPEQPDKFVNSSSKLVDSNNSGSPLSEEAGPNENTMNHNSSPVEDDAGGTRIKRKWKPSEKVLELQAEKMKKPTKSGKSSKSKSKYLVDEDDGIGFYGDDLSDG* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1908 550 Coils Coil 250 270 - -
Gso8g1908 550 MobiDBLite consensus disorder prediction 441 550 - -
Gso8g1908 550 PANTHER RETINOBLASTOMA-BINDING PROTEIN 5 1 531 IPR037850 GO:0048188
Gso8g1908 550 MobiDBLite consensus disorder prediction 451 490 - -
Gso8g1908 550 Pfam WD domain, G-beta repeat 280 324 IPR001680 GO:0005515
Gso8g1908 550 Pfam WD domain, G-beta repeat 68 95 IPR001680 GO:0005515
Gso8g1908 550 Pfam WD domain, G-beta repeat 22 51 IPR001680 GO:0005515
Gso8g1908 550 Gene3D - 5 134 IPR015943 GO:0005515
Gso8g1908 550 Gene3D - 139 419 IPR015943 GO:0005515
Gso8g1908 550 SMART WD40_4 161 202 IPR001680 GO:0005515
Gso8g1908 550 SMART WD40_4 326 365 IPR001680 GO:0005515
Gso8g1908 550 SMART WD40_4 205 245 IPR001680 GO:0005515
Gso8g1908 550 SMART WD40_4 277 324 IPR001680 GO:0005515
Gso8g1908 550 SMART WD40_4 13 51 IPR001680 GO:0005515
Gso8g1908 550 SMART WD40_4 54 95 IPR001680 GO:0005515
Gso8g1908 550 MobiDBLite consensus disorder prediction 493 521 - -
Gso8g1908 550 ProSiteProfiles Trp-Asp (WD) repeats profile. 67 104 IPR001680 GO:0005515
Gso8g1908 550 SUPERFAMILY WD40 repeat-like 23 364 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1908 Gso-Chr8 18879374 18883578 Wgd