Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1829 ATGGCACCGAATTCCATGAGTTTCCCAATGTTCTTTGTTATGTTTTCCATAGCTTTCCCTGTTGTTGTCACAGTTACCTTCATGTATCGAAACTCTAGTTTCGGACTATTCGAGGGGTATTCAGAAGGCAACTTACAAAGAGGAACATCTCAGAACGTTACTACTGCTGCTGAGCGGTTACCAAACGTTACAGAAACTCATGGCTTTCAATTGGGAAGAGCAATCCAAAATACAACACATGACAGCTCAGGAGGAAAAGATCAAGGAAATAATAACAGTACTGTCAGCAGTGGAGTTAAGGAACGACAAAGGAGATCCCAAAATCATACCTCTATTGAAGGAAGAATCAAGAATAATATTACAACAGCAGATGATGGCTCAAAAATCGCTTCATTGACAAGTTCAAAAAATGATTCAACTCCAGCACATGTTAATCTTGATGACAATGACAAGCTACTTGGTGGACTGTTAACCTCTGGATTTGATGAAGAATCGTGCATAAGTAGGATTCAGTCCCACTTGTACCGCAAAGCTTCTCCTCACAAACCTTCTCCATATTTGATATCTAAACTACGTAACTACGAAGAAATTCATACAAGGTGTGGACCTAATACTAGAGCTTATCACAGAAGCATGACAATGATTGAACACTCAAAGAACAAAGGTGCTGCTACATTGTGTAAGTACCTTATCTGGACACCTGCTAATGGTTTGGGTAACCAAATGATTAACCTGGCTGCAACATTTCTTTATGCCATCCTCACTGATCGAGTGCTACTTGTAGAATTTGGGAAAGACAAGCATGGCCTATTTTGCGAGCCATTTCTCAATTCAACTTGGATATTGCCTCGTAAGTCTCCTTTCTGGAATGAAAAGCATATAGAGACATATCAGATCTTGCTAGAGAAGGATAGGGCTAGCAATTCAACGGAGGATTTACCATCAGTTCTGTTTATTAACCTACAACACACACGTAGTGACCCTGAGAAATATTTTCACTGTGACCATAGTCAAGATCTGCTCCAGAAGATTCCTTTGTTGATTTTGCAGTCTGATCAATACTTTGTGCCCTCTCTGTTCATGAACCCTTTTTTCAACCAGGAGGTTACCAAAATGTTTCCAGAGAAAGAAACAGTTTTCCACCATTTGGGTCGCTACCTTTTTCACCCTTCAAACGAGGCATGGAAACTGATCAGCGATTACTATGAGGCACACTTGACCAAGGCAGATAAACAGATAGGCTTACAGATTAGAGTATTTAGTCCTGTTTCTACTCCACAGCAAGCAGTCATGGATCTAGTTTTAAGCTGCACATTGAAGCATAAGATACTGCCACAAGTGGATTTGCAAACTTCTGCTGGAAAAAACCAGACTACTGTAAAAGCAGTTCTTGTGGCATCTTTATATCGAGAGTATGGAGATAATCTAAAGAGGATGTATCGGAAGAATCCAACACTTAGTGGGGAAGTGATAAAAGTTTATCAGCCAAGCCATGAAGAGCATCAAAAGTATAATGATAATAAGCATAATATGAAAGCTTGGATAGACATGTATCTGCTAAGTTTATCTGACGAGTTGGTGACTACCTCTCTCTCTACTTTTGGCTACGTTGCTCAGGGATTGGGGAATTTGAAACCGTGGCTTCTTTACAAGCTAGTCAATAACGAGACCCATTTTCCACCATGTGAACGAGATTTCTCATCGGAGCCTTGTTACCATTTTCCTCCCAAGCATTACTGCAACGGAGAGCCCCTCAAAGATATTGTTTCTTCTTTCCCCTATTTGAGGCCGTGCAAGGATTTTAGGGTTGGTTTGAAGATGGTCAAAGATTCTATATAG 1839 0.4035 MAPNSMSFPMFFVMFSIAFPVVVTVTFMYRNSSFGLFEGYSEGNLQRGTSQNVTTAAERLPNVTETHGFQLGRAIQNTTHDSSGGKDQGNNNSTVSSGVKERQRRSQNHTSIEGRIKNNITTADDGSKIASLTSSKNDSTPAHVNLDDNDKLLGGLLTSGFDEESCISRIQSHLYRKASPHKPSPYLISKLRNYEEIHTRCGPNTRAYHRSMTMIEHSKNKGAATLCKYLIWTPANGLGNQMINLAATFLYAILTDRVLLVEFGKDKHGLFCEPFLNSTWILPRKSPFWNEKHIETYQILLEKDRASNSTEDLPSVLFINLQHTRSDPEKYFHCDHSQDLLQKIPLLILQSDQYFVPSLFMNPFFNQEVTKMFPEKETVFHHLGRYLFHPSNEAWKLISDYYEAHLTKADKQIGLQIRVFSPVSTPQQAVMDLVLSCTLKHKILPQVDLQTSAGKNQTTVKAVLVASLYREYGDNLKRMYRKNPTLSGEVIKVYQPSHEEHQKYNDNKHNMKAWIDMYLLSLSDELVTTSLSTFGYVAQGLGNLKPWLLYKLVNNETHFPPCERDFSSEPCYHFPPKHYCNGEPLKDIVSSFPYLRPCKDFRVGLKMVKDSI* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1829 612 MobiDBLite consensus disorder prediction 77 101 - -
Gso8g1829 612 Gene3D - 225 311 - -
Gso8g1829 612 Pfam Xyloglucan fucosyltransferase 132 580 IPR004938 GO:0008107|GO:0016020|GO:0042546
Gso8g1829 612 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 4 611 - -
Gso8g1829 612 Gene3D - 396 555 - -
Gso8g1829 612 PANTHER FUCOSYLTRANSFERASE 2-RELATED 4 611 IPR004938 GO:0008107|GO:0016020|GO:0042546
Gso8g1829 612 MobiDBLite consensus disorder prediction 77 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1829 Gso-Chr8 17916250 17921687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1829 148 608 Xyloglucan Fucosyltransferase1 AT2G03220 49.893 2.92e-160 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1829 K13681 - gmx:100818288 1230.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g3766 11 53292636 53296119 Gso8g1829 8 17916250 17921687 PCT
Gso8g1829 8 17916250 17921687 Gso11g3766 11 53292636 53296119 PCT