Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1618 ATGCAAGACCCAACAATATTCCCAGGAGTGAAGCCACCACCACATTTTCCCGAACAAGAACAACTCCAGTGTCCACGTTGTAACTCCAACAACACCAAATTCTGCTACTACAACAACTACAACCTCTCGCAGCCACGCCACTTTTGCAAGAACTGTAGAAGATACTGGACTAAAGGTGGTGCCTTGAGAAACATCCCTGTTGGGGGTGGAAGCAGAAAGACCACAAAACGTTCTTCATCAACCTCAAAACGCTCTTCTGCACCATCTTCTTCTTCCTCTGCAGTTTCGGAGCCTGACCCGACCCGTAATTGCACCAACCCGGTTGATCAAGACCAAAGGGTGCTCAACATTGGTGGTGGGAGCTTCAGTTCCCTCTTGGCTTCATCTGGGCACTTTGGAACCCTCCTGGAGGGTCTGAATCCAACTGGGTCGAGTCTCAAAATGGGTGAATTTGGGGAGGGTGTGAGTTCTGATCCGGGTTTGAATTTGGTTTCGGGTCAAAACCCGGGTTTGCAGGTGCAGAGTACTAATGGGAGGTCAGAGAGTTTTCTAGGTTTGCAAAATGGTGATTCAAGCTGTTGGAATGGTACCCATGGCTGGTCTGATCTTGCAATATACACACCTGGCCCAAGTTTTCAATAG 642 0.4875 MQDPTIFPGVKPPPHFPEQEQLQCPRCNSNNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKTTKRSSSTSKRSSAPSSSSSAVSEPDPTRNCTNPVDQDQRVLNIGGGSFSSLLASSGHFGTLLEGLNPTGSSLKMGEFGEGVSSDPGLNLVSGQNPGLQVQSTNGRSESFLGLQNGDSSCWNGTHGWSDLAIYTPGPSFQ* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1618 213 MobiDBLite consensus disorder prediction 71 111 - -
Gso8g1618 213 PANTHER DOF ZINC FINGER PROTEIN DOF3.1-LIKE 10 213 - -
Gso8g1618 213 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 10 213 IPR045174 GO:0003700|GO:0006355
Gso8g1618 213 MobiDBLite consensus disorder prediction 63 111 - -
Gso8g1618 213 ProSitePatterns Zinc finger Dof-type signature. 24 60 IPR003851 GO:0003677|GO:0006355
Gso8g1618 213 Pfam Dof domain, zinc finger 20 76 IPR003851 GO:0003677|GO:0006355
Gso8g1618 213 ProSiteProfiles Zinc finger Dof-type profile. 22 76 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1618 Gso-Chr8 15836420 15837897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1618 14 136 C2C2-Dof Transcription Factor Family AT1G51700 56.028 4.42e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gso8g1618 zf-Dof 7.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1618 - - gmx:121172632 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0104 7 944830 946674 Gso8g1618 8 15836420 15837897 GST
Gso15g0202 15 1788804 1790423 Gso8g1618 8 15836420 15837897 PCT
Gso11g3610 11 51793846 51795434 Gso8g1618 8 15836420 15837897 PCT
Gso8g1618 8 15836420 15837897 Gso15g0202 15 1788804 1790423 PCT
Gso8g1618 8 15836420 15837897 Gso11g3610 11 51793846 51795434 PCT