Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1444 ATGGAGGAGCCAACGTTGTTGTTCCCCGACACCGACCTCGATCTCAGCTTCACCAGCACCACCACTGACCGCACCACCACCACCACCACCACCAGTGCAAGAACAAGCCTCGCCCGCACTAGCAGCCTCACCCTCAGCTTCAACGACCGTTTGTCCACATTCTCCGCCTCGGAAACCACCACCGCCTCCCTTATCAGCCGCCGTCCCCACCGGAGCGGCGATCCCAACTGGTCCGCCATTCAGGCCGCCGTCAACCTCTCCTCCGACGGCCGCCTCCACCTCCGCCACCTTAAGCTCCTCCGCCACCTCGGCTCCGGCAACCTCGGCCGCGTCTTCCTCTGCCGCCTCCGTGACTACGACGGCGCCCACTTCGCCCTCAAGGTCGTCGACAAAGACCTCCTCACCCCGAAGAAACTCTCCCACGCGCAGACCGAAGCGGAGATCCTACACGCGCTGGACCACCCCTTCCTCCCCACTCTCTACGCGCGTATCGACGTTTCGCATTACACGTGCCTTCTCATGGACTTCTGCCCCGGCGGCGACCTCCACTCCCTCCTCCGCAAACAGCCCCAGTTTCGTCTCCCCCTCGCGGCGGCGCGTTTCTTCGCCGCCGAGGTCCTCGTCGCCCTGGAGTACCTCCACGCGCTCGGCATCGTCTACCGCGACCTCAAACCCGAGAACGTCCTCCTGCGCGACGACGGCCACGTCATGCTCTCGGATTTCGATTTGTGCTTCAAATCGGACGTGGCACCAAACGTCAACTTCCGGTCCCACACCTCACCACCTCGCGTGGGCCCCACGAGCGGTTGCTTCAGTTGTAATAATAATAACCGCCACCGAGAAAAGTTGGTTGCAGAGTTCGTGGCGGAACCGGTGACGGCGTTTTCACGGTCGTGCGTTGGGACGCACGAGTATTTAGCTCCCGAGCTTGTCTCGGTTAACGGTCACGGTAACGGCGTGGACTGGTGGGCTTTTGGGGTTTTCGTTTACGAGTTGTTGTACGGGACGACGCCGTTTAAGGGGTGTAGCAAGGAGGGCACGCTGCGCAATATAGCATCAAGCAAGGATGTGAGGTTCGTCCACGTGGCGGAGCGAGAGGAGGCAGGGATGGCCGAGGCGAGGGATTTGATTGAGAAGTTGTTGGTGAAGGACCCTAGGAAGAGGCTAGGGTGCGCTAAGGGTGCTACTGAGATTAAACTACACCCTTTTTTTTATGGAATTAAGTGGCCTTTGATTAGGACTTATAGGCCACCGGAGGTCAAGGGATTCATCAGAAGGAATAAGTCCAACGTTACTTGCAAGAGAAACACCTGCTGGTGGAAGAGACTAGGGCTTCTTGTGAGGAACAAAGGGGGATGTCGAGGATATTGGGGTGGAAGAGAAGTTTAA 1389 0.5889 MEEPTLLFPDTDLDLSFTSTTTDRTTTTTTTSARTSLARTSSLTLSFNDRLSTFSASETTTASLISRRPHRSGDPNWSAIQAAVNLSSDGRLHLRHLKLLRHLGSGNLGRVFLCRLRDYDGAHFALKVVDKDLLTPKKLSHAQTEAEILHALDHPFLPTLYARIDVSHYTCLLMDFCPGGDLHSLLRKQPQFRLPLAAARFFAAEVLVALEYLHALGIVYRDLKPENVLLRDDGHVMLSDFDLCFKSDVAPNVNFRSHTSPPRVGPTSGCFSCNNNNRHREKLVAEFVAEPVTAFSRSCVGTHEYLAPELVSVNGHGNGVDWWAFGVFVYELLYGTTPFKGCSKEGTLRNIASSKDVRFVHVAEREEAGMAEARDLIEKLLVKDPRKRLGCAKGATEIKLHPFFYGIKWPLIRTYRPPEVKGFIRRNKSNVTCKRNTCWWKRLGLLVRNKGGCRGYWGGREV* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1444 462 ProSiteProfiles Protein kinase domain profile. 97 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1444 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Gso8g1444 462 SMART serkin_6 97 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1444 462 Pfam Protein kinase domain 99 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1444 462 Gene3D Phosphorylase Kinase; domain 1 96 180 - -
Gso8g1444 462 Gene3D Transferase(Phosphotransferase) domain 1 296 418 - -
Gso8g1444 462 PANTHER TELOKIN/MYOSIN LIGHT CHAIN KINASE-RELATED 8 435 - -
Gso8g1444 462 Gene3D Transferase(Phosphotransferase) domain 1 181 247 - -
Gso8g1444 462 SUPERFAMILY Protein kinase-like (PK-like) 76 419 IPR011009 -
Gso8g1444 462 PANTHER FLIPPASE KINASE 1-RELATED 8 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1444 Gso-Chr8 14023433 14027305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1444 1 455 AGC Kinase Gene Family AT3G14370 65.605 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso8g1444 Pkinase 5.3e-54 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1444 8 14023433 14027305 Gso8g1444 8 14023433 14027305 ECH