Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1406 ATGCCCCTCTCACCCTCTTCCATGGCTTCAATCCCACAATTCTATCAAAACTACACGTTCACCACTCACGATCTTTCCGACTACCCTACCCCTCTTCTCAATGGCGGTGGTGGCAGCAACGACATCGTTAATGCGTCGGTTATGGACACCACCACCGTGTGGGGTGGTGGGCAAGATAGCTTGATTAATATTCCTGTGCTGGATATGAACAATGGTGCACTTGATCATATTGTGTCGCTTGATTGCGACACCATGGCTTGTGCTGCTAATTGGATGCCATCTTTTTCTGAGCAGCTTGGGGGGTTTTCGGATTTGGCCATTTCGGACTGCAAAATGGGGTTCTATGGAGGGTTTCAGAGTTTCAACAACAACAGATCGTACCAACCTCATGTTGGGGAGTTTGGAGATGAATGTTGTGGGTTTGTGGAGGATGTTAAGCCACCTGCTTATCCTAATGCTGCCAGAGAAAATTGGGGAATTCAAGGTAATCAAATGGCAGCAATTGAAGAGCCTAACATAAAGGTAGGAAGGTACTCAGAAGAAGAGAGGAAAGAAAGAATTCTCCGATATTTGAAGAAAAGAAATCAAAGAAACTTTAACAAAACCATCAAGTACGCATGTCGGAAAACCTTAGCTGATAGGCGAGTAAGGGTTAGGGGAAGGTTTGCAAGAAACAATGAGCTTTGTGAAGAAGACATGGCAACAAAAAAGCATCAGAATCATCATCACCACAAAGGAGATTTTTATGGTGGCGATTCAATCCAGTTCCAGTTAAAGAATGATGAGGAGGATTGGCTTCAAGAGGCCATGGCAAGTCTAGTGTATTTATCTCATTCTTCACCGGAAGATATGTAA 855 0.4409 MPLSPSSMASIPQFYQNYTFTTHDLSDYPTPLLNGGGGSNDIVNASVMDTTTVWGGGQDSLINIPVLDMNNGALDHIVSLDCDTMACAANWMPSFSEQLGGFSDLAISDCKMGFYGGFQSFNNNRSYQPHVGEFGDECCGFVEDVKPPAYPNAARENWGIQGNQMAAIEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEEDMATKKHQNHHHHKGDFYGGDSIQFQLKNDEEDWLQEAMASLVYLSHSSPEDM* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1406 284 Pfam CCT motif 183 225 IPR010402 GO:0005515
Gso8g1406 284 PANTHER ACTIVATOR OF SPOMIN::LUC2 8 279 - -
Gso8g1406 284 ProSiteProfiles CCT domain profile. 183 225 IPR010402 GO:0005515
Gso8g1406 284 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 8 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1406 Gso-Chr8 13541428 13544070 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso8g1406 CCT 9e-17 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1406 8 13541428 13544070 Gso8g1406 8 13541428 13544070 ECH