Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1397 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTCGAGAGCAGCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCTGACCAGCAGAGGTTGATTTTTGCTGGTAAGCAGCTGGAAGATGGTCGCACTCTTGCTGATTATAACATACAAAAGGAATCAACACTTCACTTGGTCTTGAGGCTAAGGGGAGGTACCATGATTAAAGTGAAGACTTTAACTGGGAAAGAAATTGAAATTGACATTGAACCAACTGATACAATCGACCGGATCAAGGAACGTGTAGAAGAAAAAGAGGGAATTCCACCTGTGCAGCAGAGACTCATATATGCCGGTAAGCAGCTTGCTGATGACAAAACAGCTAAAGAGTACAACATTGAGGGTGGTTCTGTACTTCACTTGGTGCTTGCATTGAGGGGTGGTACTTATTAG 465 0.4581 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEGGSVLHLVLALRGGTY* 155
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1397 154 PANTHER - 1 152 - -
Gso8g1397 154 ProSiteProfiles Ubiquitin domain profile. 77 152 IPR000626 GO:0005515
Gso8g1397 154 PANTHER UBIQUITIN 1 152 - -
Gso8g1397 154 ProSiteProfiles Ubiquitin domain profile. 1 76 IPR000626 GO:0005515
Gso8g1397 154 Pfam Ubiquitin family 79 150 IPR000626 GO:0005515
Gso8g1397 154 Pfam Ubiquitin family 3 74 IPR000626 GO:0005515
Gso8g1397 154 ProSitePatterns Ubiquitin domain signature. 27 52 IPR019954 -
Gso8g1397 154 Gene3D - 1 77 - -
Gso8g1397 154 Gene3D - 78 154 - -
Gso8g1397 154 PRINTS Ubiquitin signature 11 31 IPR019956 -
Gso8g1397 154 PRINTS Ubiquitin signature 32 52 IPR019956 -
Gso8g1397 154 PRINTS Ubiquitin signature 53 74 IPR019956 -
Gso8g1397 154 CDD Ubl_NEDD8 79 152 IPR038738 -
Gso8g1397 154 ProSitePatterns Ubiquitin domain signature. 103 128 IPR019954 -
Gso8g1397 154 CDD Ubl_ubiquitin 1 76 - -
Gso8g1397 154 SMART ubq_7 77 148 IPR000626 GO:0005515
Gso8g1397 154 SMART ubq_7 1 72 IPR000626 GO:0005515
Gso8g1397 154 SUPERFAMILY Ubiquitin-like 79 152 IPR029071 -
Gso8g1397 154 SUPERFAMILY Ubiquitin-like 1 76 IPR029071 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso8g1397 Gso-Chr8 13361952 13366145 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1397 8 13361952 13366145 Gso8g1397 8 13361952 13366145 ECH