Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1370 ATGGCCTCAGCCGCATCCCCCACCACTTTCTCTCTCCTCCACTCCGCCACCCCTTCCTCCTCCTCCACCGCCACCTCCGCCTCCCCCTCCCCCTCGCGCGTGCAGCTCACCTCCTCCCTCCGCGCCCGCCCGCTGCGCCGCCTGGGCTTCGCCGCGGCGGACCCGCTGCTCGCGGCGAGTGTAGCGGCGCGCGTGGCGGCGGTGAGAGGAGGAGGAAAGGGCGCGAGGGGGGTGGTGTCGATGGCGAAGAAGAGCGTGGGGGACCTGAGCGCGGCGGACCTGAAGGGGAAGAAGGTCTTCGTCAGGGCCGACCTCAACGTCCCGCTCGACGACAACCAGAACATCACCGACGACACCAGAATCCGCGCCGCCATTCCCACCATCAAACATCTCATCCAAAACGGCGCCAAAGTCATTCTCTCCAGCCACTTGGGGCGGCCGAAGGGTGTCACTCCCAAATACAGCTTGGCGCCTCTTGTACCCCGGCTTTCTGAGCTCATTGGTATCCAGATTGTCAAGGCCGAGGACAGTATTGGTCCAGAAGTAGAAAAGTTGGTGGCTTCTCTTCCAGATGGAGGTGTTCTCCTTCTAGAAAATGTGAGGTTTTACAAGGAGGAAGAAAAGAATGACCCCGAGCATGCAAAAAAGCTTGCCTCTCTGGCAGATCTGTATGTGAATGATGCATTTGGTACTGCTCACAGGGCACATGCATCAACAGAGGGTGTTACTAAATACCTGAAGCCATCTGTTGCTGGTTTTCTTTTGCAAAAGGAACTTGATTACCTTGTTGGGGCAGTATCAAACCCCAAAAGGCCATTTGCTGCCATTGTTGGTGGTTCCAAAGTCTCATCTAAAATTGGAGTGATTGAGTCACTTTTAGAAAAAGTTGACATCCTTCTTCTTGGTGGAGGAATGATCTTCACATTTTACAAGGCACAAGGTCTTTCAGTGGGTTCATCCCTTGTAGAAGAAGATAAGTTGGATCTTGCTACATCACTACTTGCAAAAGCCAAGGAAAAGGGGGTGTCTCTCTTGTTACCAAGTGATGTGGTGATTGCAGACAAATTTGCTCCTGATGCTAATAGCAAGGTCGTGCCAGCATCTGCCATCCCTGATGGCTGGATGGGATTGGATATTGGTCCAGATTCTGTTAAATCATTCAGTGAAGCATTGGATACTACCCAAACCATCATATGGAATGGACCAATGGGAGTGTTTGAGTTTGACAAGTTTGCTGTTGGTACAGAGGCTATTGCAAAGAAGCTGGCTGACCTCAGTGGAAAGGGGGTGACCACAATTATTGGAGGAGGAGATTCTGTTGCAGCTGTGGAGAAAGTAGGAGTTGCTAGTGTCATGAGCCACATATCTACTGGTGGTGGTGCCAGTTTGGAGTTATTGGAAGGCAAAGAGCTTCCAGGAGTCCTTGCTCTTGATGAAGCCGTCCCAGTCGCTGTGTAA 1458 0.5254 MASAASPTTFSLLHSATPSSSSTATSASPSPSRVQLTSSLRARPLRRLGFAAADPLLAASVAARVAAVRGGGKGARGVVSMAKKSVGDLSAADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAIPTIKHLIQNGAKVILSSHLGRPKGVTPKYSLAPLVPRLSELIGIQIVKAEDSIGPEVEKLVASLPDGGVLLLENVRFYKEEEKNDPEHAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLDLATSLLAKAKEKGVSLLLPSDVVIADKFAPDANSKVVPASAIPDGWMGLDIGPDSVKSFSEALDTTQTIIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVASVMSHISTGGGASLELLEGKELPGVLALDEAVPVAV* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1370 485 PANTHER PHOSPHOGLYCERATE KINASE 1 480 - -
Gso8g1370 485 Pfam Phosphoglycerate kinase 91 469 IPR001576 GO:0004618|GO:0006096
Gso8g1370 485 ProSitePatterns Phosphoglycerate kinase signature. 98 108 IPR015911 GO:0004618|GO:0006096
Gso8g1370 485 CDD Phosphoglycerate_kinase 92 479 IPR001576 GO:0004618|GO:0006096
Gso8g1370 485 MobiDBLite consensus disorder prediction 1 37 - -
Gso8g1370 485 Gene3D - 154 480 IPR015824 GO:0004618|GO:0006096
Gso8g1370 485 Gene3D - 51 152 IPR015824 GO:0004618|GO:0006096
Gso8g1370 485 PANTHER PHOSPHOGLYCERATE KINASE 1 480 IPR001576 GO:0004618|GO:0006096
Gso8g1370 485 SUPERFAMILY Phosphoglycerate kinase 88 479 IPR036043 GO:0004618|GO:0006096
Gso8g1370 485 Gene3D - 268 455 IPR015824 GO:0004618|GO:0006096
Gso8g1370 485 Hamap Phosphoglycerate kinase [pgk]. 88 479 IPR001576 GO:0004618|GO:0006096
Gso8g1370 485 PRINTS Phosphoglycerate kinase family signature 93 109 IPR001576 GO:0004618|GO:0006096
Gso8g1370 485 PRINTS Phosphoglycerate kinase family signature 115 137 IPR001576 GO:0004618|GO:0006096
Gso8g1370 485 PRINTS Phosphoglycerate kinase family signature 192 207 IPR001576 GO:0004618|GO:0006096
Gso8g1370 485 PRINTS Phosphoglycerate kinase family signature 220 242 IPR001576 GO:0004618|GO:0006096
Gso8g1370 485 PRINTS Phosphoglycerate kinase family signature 251 273 IPR001576 GO:0004618|GO:0006096
Gso8g1370 485 PRINTS Phosphoglycerate kinase family signature 274 293 IPR001576 GO:0004618|GO:0006096
Gso8g1370 485 PRINTS Phosphoglycerate kinase family signature 396 421 IPR001576 GO:0004618|GO:0006096
Gso8g1370 485 PRINTS Phosphoglycerate kinase family signature 432 443 IPR001576 GO:0004618|GO:0006096
Gso8g1370 485 PRINTS Phosphoglycerate kinase family signature 455 472 IPR001576 GO:0004618|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1370 Gso-Chr8 13135532 13139227 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1370 8 13135532 13139227 Gso8g1370 8 13135532 13139227 ECH