Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1366 ATGCACAAATTGGGAAGAGGTCATCGTGACAAACTCCAGCAGTTCATAACAATAACTGGAGCCAGCGAGAAACTAGCCCTGCAGGCTCTGAAGGCTAGTGATTGGCATCTTGAAGGAGCATTTGATTTCTTTTACAGCCAACCCCAGCTTAAAACATTTACTGATTCTAGGCACTTGGAGGAGCTATACAATAGATATAAAGATGCATATGTTGATATGATTTTGGCAGATGGTATCACTCTCCTTTGCAATGATATCCAGGTGGATCCTCAAGATATAGTAATGTTAGTTCTTTCATGGCACATGAAGGCTGGCACCATGTGTGAATTTTCCAAGAAGGAGTTTATTGAAGGTCTACAATCTTTGGGGATTGATTCTCTGGAAAAGTTCCGTGAAAAGATACCTTATATGCGCTCTGAGCTGAAAGATGAACAGAAATTCCGTGAGATATATAATTTTGCTTTTGGCTGGGCAAAAGAGAAGGGTCAAAAATCTCTTGCATTGGATACTGCTATTGGTATGTGGCAATTATTATTTGCTGAGAAGCAGTGGCCGCTGGTTGATCATTGGTGCCAGTTCTTGCAGGCTCGGCATAACAAAGCAATATCTAGGGACACATGGTCTCAGCTTTTGGAGTTTGCAAAGACTGTTGGCTCAAATTTATCTGATTATGATGCCGAAGGTGCTTGGCCATATCTTATTGATGAATTTGTGGAGTATCTCAACGAGAATGGCATAATCCAAAATGATCTGATCAATGATTCTAGTCTAAAACGATGA 780 0.4064 MHKLGRGHRDKLQQFITITGASEKLALQALKASDWHLEGAFDFFYSQPQLKTFTDSRHLEELYNRYKDAYVDMILADGITLLCNDIQVDPQDIVMLVLSWHMKAGTMCEFSKKEFIEGLQSLGIDSLEKFREKIPYMRSELKDEQKFREIYNFAFGWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQARHNKAISRDTWSQLLEFAKTVGSNLSDYDAEGAWPYLIDEFVEYLNENGIIQNDLINDSSLKR* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1366 259 Pfam UBA-like domain 9 47 - -
Gso8g1366 259 Gene3D - 53 142 - -
Gso8g1366 259 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 13 249 - -
Gso8g1366 259 SUPERFAMILY UBA-like 7 46 IPR009060 GO:0005515
Gso8g1366 259 Pfam Cullin binding 130 240 IPR005176 -
Gso8g1366 259 Gene3D - 6 47 - -
Gso8g1366 259 PANTHER RP42 RELATED 13 249 IPR014764 -
Gso8g1366 259 Gene3D Cullin, PONY binding domain 143 250 IPR042460 -
Gso8g1366 259 CDD UBA_DCNL 8 48 - -
Gso8g1366 259 ProSiteProfiles DCUN1 domain profile. 54 242 IPR005176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1366 Gso-Chr8 13081484 13089729 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1366 8 13081484 13089729 Gso8g1366 8 13081484 13089729 ECH
Gso8g1366 8 13081484 13089729 Gso15g2158 15 49622931 49630196 GST