Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1361 ATGGTCATGGAAACAAGCGGAGTGAGAAAGAATGTTGGGATACTCCTCCTCTACCTCACTTTGGCTGCAATTTCTCTCACTCATTGTGATGCAGATAGATCAATGAGACTATTGAGAGGGCCCAAACATAGAAGAAATACAACCAACAAGAACCCAAAGAAGTTGAAAACGGTTAAGCATTTTGATGTGAATCCAACCATATTCTCATCAAATGTACAACCCTATAGTCTCAGCTCCCCATTCTCTTTGCCCCCTTATGAATCACTTGCTCCAATCCCATTGCCAGAAAACAGCCCTCCATTTTGTGTGTTTCCACCACCTGGCACTCCTTCCACCACCATTCCCACACCCACAGGCTTTGAACCCACCACACCATCACCTCCTTACTATGACACCTCACCACCAAGCCCAACAACCATAACACCTGGCCCACCAGAGTCCTTCCCCACACCAACTCCGGAAACCGTTCCAGGCCCACCCAGCATCACCCCGGGCTCGCCAGAGCCCGTGCTCAACCCTCCCATCATTATTCCAAGCCCACCTGACTCCTCAATGGGCCCACCCGGGATCACACCAGGCTCTCCTGAGCCCGTACTCAATCCTCCCATCATTATTCCAAGCCCACCTGACTCCTCAATGGGCCCACCCTACTTTGAGCCCACCCCACCATTCATAATCCCTTCCCCCACGGGTGGCATCACCCCAGGCCCACCAAGCACTGTTCCATCCCCCACTGAAGGCACTGTCCCAAGCCCAAGTGTGTTTCAGCCACCTGTGGTGTACCCTCCACCGAGTGTGCCACCACCACCCAACTATGCCCCTAGGACCACCTTGTGGTGTGTGGCTAAGCCCTCAGTCCCAGACCCAATCATCCAAGAGGCCATGAACTATGCTTGCTGGTCAGGAGCAGACTGCACTTCAATTCAGCCCAATGGGCCGTGCTATGAGCCCAACACTGTGTATGCACATGCTTCATACGCTTTCAATAGTTATTGGCAAAGGACCAAAGGTGCTGGTGGCAATTGTGAATTTGGAGGCACAGCGATGCTGGTTGCAGTTGATCCTAGCTTTGATGGGTGCCACTTCATCTACAACTGA 1098 0.5237 MVMETSGVRKNVGILLLYLTLAAISLTHCDADRSMRLLRGPKHRRNTTNKNPKKLKTVKHFDVNPTIFSSNVQPYSLSSPFSLPPYESLAPIPLPENSPPFCVFPPPGTPSTTIPTPTGFEPTTPSPPYYDTSPPSPTTITPGPPESFPTPTPETVPGPPSITPGSPEPVLNPPIIIPSPPDSSMGPPGITPGSPEPVLNPPIIIPSPPDSSMGPPYFEPTPPFIIPSPTGGITPGPPSTVPSPTEGTVPSPSVFQPPVVYPPPSVPPPPNYAPRTTLWCVAKPSVPDPIIQEAMNYACWSGADCTSIQPNGPCYEPNTVYAHASYAFNSYWQRTKGAGGNCEFGGTAMLVAVDPSFDGCHFIYN* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1361 365 MobiDBLite consensus disorder prediction 229 250 - -
Gso8g1361 365 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN 13 100 - -
Gso8g1361 365 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN 202 365 - -
Gso8g1361 365 MobiDBLite consensus disorder prediction 229 245 - -
Gso8g1361 365 Pfam X8 domain 278 349 IPR012946 -
Gso8g1361 365 MobiDBLite consensus disorder prediction 105 198 - -
Gso8g1361 365 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 13 100 IPR044965 GO:0004553|GO:0005975
Gso8g1361 365 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 202 365 IPR044965 GO:0004553|GO:0005975
Gso8g1361 365 MobiDBLite consensus disorder prediction 120 198 - -
Gso8g1361 365 PRINTS Proline rich extensin signature 83 95 - -
Gso8g1361 365 PRINTS Proline rich extensin signature 103 119 - -
Gso8g1361 365 PRINTS Proline rich extensin signature 125 137 - -
Gso8g1361 365 PRINTS Proline rich extensin signature 137 158 - -
Gso8g1361 365 PRINTS Proline rich extensin signature 167 183 - -
Gso8g1361 365 Gene3D - 274 361 - -
Gso8g1361 365 SMART X8_cls 278 362 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1361 Gso-Chr8 13023977 13026155 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1361 8 13023977 13026155 Gso8g1361 8 13023977 13026155 ECH
Gso8g1361 8 13023977 13026155 Gso15g2164 15 49742542 49744893 GST