Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1644 ATGGGTTTGAGTTCTAAGCAGGTTTCTAGCAGTGGACTTGATTGGAAACAAACCTTGTTGGAGGCTCAGAATTTGGAACTTCCAAAGCCTAATCTGATGAGGAAACAACAGCAGCAGCAGCAGCAACAACAACAACAAACTCAGCCGAATTCAGAGTCTTTGAAATGTCCAAGATGTGACTCTACCAACACCAAATTTTGTTACTACAACAACTACAACAAGTCTCAGCCTCGCCATTTCTGCAGGGCTTGCAAGAGGCACTGGACTAAAGGTGGAACTCTACGCAATGTTCCAGTTGGTGGTGGAAGGAAGAACAAGAGGGTCAAAAAATCAATCACTCCAATTACAACATCTTCCACCACCACCACACCAATCACAACCGCCACTTCAACTTGCACTGCCACAGTCACAACCTCAATTGGCAACAACATGGATGCTATGTTGGGTTGTTATAGCCACATGACAATCCAAACTCCTCTTGCGGATGATCAGAAAAACATGTCTTCCTCTCTCTACCAAGCTCTAATTCGTCCACCACCTTTGCTGCTACAACAGAATCTGCTCAACACAAGAGAATTAGAAGGCAAAGATTTTGGTATTGGTATCGGTAATAATGGTATCTTTCCTAGTTCAACTTTGGCTCTTCCTACTCATCAAAGCCAAAGCCTACTCTTCCCTTTCTCAGCCTCAAGCAGATCTTTTGACACCAACCCTTGTTCAGTAGTGTCAACCTCTCTTAGATCCTCCAATGTTTATAACTATGGGGAGGATCAGTTTAAAGCAATAGAGGAACCAACCATCAATAGTACTACTGCTACTATAGTGCCTAGCACAGGTGGCACCAACAACACACATCATCCATGGGAGATAGCAGCAGCAACAAGTGGTGTTGGCTTGGGAACTTCTTCAAATTCAAACTATTGGAATTGGGAGGATTTTGATTCATTGGTTTCAACTGATCTAAAAGATCCCTGGGATGATTCAGATATCAAACCCTGA 999 0.4324 MGLSSKQVSSSGLDWKQTLLEAQNLELPKPNLMRKQQQQQQQQQQQTQPNSESLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVKKSITPITTSSTTTTPITTATSTCTATVTTSIGNNMDAMLGCYSHMTIQTPLADDQKNMSSSLYQALIRPPPLLLQQNLLNTRELEGKDFGIGIGNNGIFPSSTLALPTHQSQSLLFPFSASSRSFDTNPCSVVSTSLRSSNVYNYGEDQFKAIEEPTINSTTATIVPSTGGTNNTHHPWEIAAATSGVGLGTSSNSNYWNWEDFDSLVSTDLKDPWDDSDIKP* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1644 332 MobiDBLite consensus disorder prediction 32 55 - -
Gso7g1644 332 ProSiteProfiles Zinc finger Dof-type profile. 54 108 IPR003851 GO:0003677|GO:0006355
Gso7g1644 332 Pfam Dof domain, zinc finger 53 106 IPR003851 GO:0003677|GO:0006355
Gso7g1644 332 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 37 218 IPR045174 GO:0003700|GO:0006355
Gso7g1644 332 ProSitePatterns Zinc finger Dof-type signature. 56 92 IPR003851 GO:0003677|GO:0006355
Gso7g1644 332 PANTHER OS06G0284500 PROTEIN 37 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1644 Gso-Chr7 38424534 38426512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1644 42 201 C2C2-Dof Transcription Factor Family AT1G51700 40.741 3.93e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gso7g1644 zf-Dof 1.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1644 - - gmx:100818111 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1644 7 38424534 38426512 Gso15g0613 15 5466076 5468415 PCT
Gso7g1644 7 38424534 38426512 Gso11g2682 11 42771795 42773945 PCT
Gso15g0613 15 5466076 5468415 Gso7g1644 7 38424534 38426512 PCT
Gso11g2682 11 42771795 42773945 Gso7g1644 7 38424534 38426512 PCT