Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1313 ATGATGCAGTCAGAGGATCTGCAATTCCAATGGCCATTCTTTGAAGACATGAACTCAACTTTTGATCAAGGTGTTGAGTCCTATGGTTTCACCACCATGGATGACCATGTTGGTAATTGTGAACCTTATGGCTTCACTATGGATGACCATGTTGGTAATTGTGAACCTTATGGCTTCACTATGGATGACCATGTCGGTGATTGTGGCCTCAGTACTCTATTGAGCACTCCAGGGGATTCTACTTCTGAAATTTGTTCCATCCCCTTTCCTTCCTCCCCCATGTTCTCCAATGATCATATTCATATCCAATACCCAATCAATGAAGAAACCATGGACCTTCCATCACTGATGGAATTGGATGATTTTTATTCCATCTTGGATACTCAAATTATTAGTATTCAAGGTCATGGAGAAAGTGAAGGGAGCTTCTTCCCTTCACAGAATTTGTCAAGTGAGGTGGAAAATGCATGGAGTCCAACCCCATCTGTGATGTCAGAATTGTCCACAAATCAAACATCACCATTGACCTTACCACTAGAAAACATGGAAATTGAAAAACAAGTGAGCCTTCCACACTTGTTGAAGGCCTATGGAGAAGCCTTGGAGCAAGGACAAAAAGCACTGGAAGAAGTGACTTTGAGGCGCATAAGCCAGAAAGCTAGTCCACTTGGTGAGTCTTTAGAGCGCTTTGCATTCTACTTGTCCCAAGGCATGACAAATCATGGAGACTATCTCAAAGGGGAGGCCTTCAAGAACTTTGGGATTACTTTGAGGGCACTCTATCAAGGATTCCCAATTGGGAAAATTGCTCACTTTGCAGCTGTTTCAACAATTCTTGAAGCCATGCCACAAGATTATGATGTTGTGCACATAGTGGACTTTTGTATTGGACATGGTGTTCAATGGCCTCCAATGATTGAGGCTATTGCACACATGCACAAAACATTGAAATTGACAACAATCAAATGGGGTGGTGAGGGTTCTGAATGTGTCTCTAGTCCATGCAATTTTGATGAAACTAGAAGGCAGCTCTATGAGCATGCCAAATCCTGTGGTTTGAAGTTGAAGGTAGAGGAGAAAGGCGTGGAGGAATTGGTTACTGAGATTAAGAAAATGAACAAAAAAGGTGGGAGGAGAGAGTTTTTGGCCTTCAATTGCATGATTGATCTGCCACATATGGGAAAAGTAAGGAGCAGAAAAAATGCCTTGCAGTTTCTAAGGGTAGCTGAGGAATTGATCAACACCTCTGGCAACAGGGGAATTATCACTTTTGGGGATGGGGGTGCTTTTGAGAAAGTGAAAAATAACTTGAATTTCTGGTCATTTTTTTATGGACACTTGGTGCATTACCAAATCTTGTTAGAATCAATGGAATCACATTTTCCAACCCGTTTCTCAGAAGTGAGAATTGCCATGGAGCAATTATTTTTACAACCTTGCATCTCTTCTCTTGATTGGTTACAAACATGGGAGGAGATGAAAAGGGGTGACCATCTTGAGGCAGAGACTAGCTTAGAAGGTTGCCAATTAAGCAAAAATATCTTAATGGAAATCAGAGAAGTGTTGAGAGAAAGTGAAGGTTCCTATCAGGCCAAAATTGAAGGACAACATGACAATGAACTAGTTTTGGAGTACAAAGGAACTCAACTATTAAGATTTTCAACTTGGAAAAACTAA 1677 0.4109 MMQSEDLQFQWPFFEDMNSTFDQGVESYGFTTMDDHVGNCEPYGFTMDDHVGNCEPYGFTMDDHVGDCGLSTLLSTPGDSTSEICSIPFPSSPMFSNDHIHIQYPINEETMDLPSLMELDDFYSILDTQIISIQGHGESEGSFFPSQNLSSEVENAWSPTPSVMSELSTNQTSPLTLPLENMEIEKQVSLPHLLKAYGEALEQGQKALEEVTLRRISQKASPLGESLERFAFYLSQGMTNHGDYLKGEAFKNFGITLRALYQGFPIGKIAHFAAVSTILEAMPQDYDVVHIVDFCIGHGVQWPPMIEAIAHMHKTLKLTTIKWGGEGSECVSSPCNFDETRRQLYEHAKSCGLKLKVEEKGVEELVTEIKKMNKKGGRREFLAFNCMIDLPHMGKVRSRKNALQFLRVAEELINTSGNRGIITFGDGGAFEKVKNNLNFWSFFYGHLVHYQILLESMESHFPTRFSEVRIAMEQLFLQPCISSLDWLQTWEEMKRGDHLEAETSLEGCQLSKNILMEIREVLRESEGSYQAKIEGQHDNELVLEYKGTQLLRFSTWKN* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1313 558 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 40 557 IPR005202 -
Gso7g1313 558 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 40 557 - -
Gso7g1313 558 Coils Coil 355 375 - -
Gso7g1313 558 Pfam GRAS domain family 192 557 IPR005202 -
Gso7g1313 558 ProSiteProfiles GRAS family profile. 181 557 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1313 Gso-Chr7 19073742 19075655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1313 191 557 GRAS Transcription Factor Family AT5G66770 25.065 1.83e-15 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso7g1313 GRAS 4.7e-35 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1313 - - gmx:100792407 1138.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1655 18 48502215 48504065 Gso7g1313 7 19073742 19075655 GST