Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0346 ATGATCATGGAACCAAACCCAACACCAGATCACAGTCTGGACTGGTTTGAAGGTTCTGTGTCTTACTTTCCACCATTCTTAGATTATCCATACAACTCTAGTGACATCCAAGAGTATCAGTTGTGGGAACAAGACATAGCTAGCAACTACCAAACTGATACCAATACCAGTTCCCCTAATGCCACCAACATTGTTACCATCACAACACCCCTTGAGACTTGTGACTCTAACAACCTACCACTTTCTGATTTGCCCAAGAAAAGAAGTGCCACTGATGAGTCAAGTCCCAAACCACCACAAAACCACAAGCACAAGAAAATCAAGAGCAAGCCCAGGAACAATGAAGCAGATAACGGAGATGCAGAAGCGACAACAACAACAACAGCAACAGTTAGAAAATCTGGTGGGAACAAGAAAGGTGGAGCTAAGGCCAATGGAAATAACTGCAACAATAAGGATGGGAGGTGGGCAGAACAGTTGTTGAACCCTTGTGCTGCAGCCATAACTGGTGGAAATCTGAACCGTGTGCAACACCTCTTGTATGTTCTCCATGAGTTAGCATCACCAACTGGTGATGCTAACCACAGGCTTGCAGCACATGGTCTCAAAGCACTGACACAACACTTATCTTCTTCTCCAACTTCTACCTCTTCAGGGTCTATAACTTTTGCGTCTGCTGAGCCACGGTTCTTCCAAAAGACACTACTCAAGTTCTATGAAGTTAGCCCTTGGTTTTCCTTTCCTAACAACATAGCAAATGCTTCCATTCTTCAAGTTCTTGGGGAAGACACTGATAATTCACGCACCCTTCACATCCTTGACATTGGAGTCTCTCATGGCATGCAATGGCCAACGTTTCTTGAGGCGTTGAGTCGCAGAGCTGGTGGACCTCCTCCATTGGTTCGCCTCACCGTGGTCACTGCTTCTTCCTCCACTGAAAATGACACCCCATTTTGTATTGGTCCTCCTGGTGATAACTTCTCTTCTAGACTCCTTGGTTTTGCTCAGTCAATGAATGTTAATTTGCAGATAAACAAGCTAGATAATTGCCCATTGCATTCACTGAATGCTCAAAGTGTTGACGCCTCCCCGGATGAAATCTTTGTTGTGTGTGCACAGTTTAGGTTGCATCAGTTAAATCACAATGCCCCAGATGAAAGGAGTAAGTTTCTGACAGTGTTGAGGAACATGGAGCCCAAAGGGGTGATACTAAGTGACAACAACCTGGGGTGTTGTTGCAATTGTTGTGGGGATTTCGCCACTGGATTCTCTCGGAGGGTGGAGTACTTGTGGAGGTTTTTGGACTCAACGAGCTCTGCATTCAAAGGCAGGGAGAGCGAGGAGAGGAGAGTGATGGAAGGTGAGGCTGCGAAGGCATTGACAAACCAGCGCGAGACGAATGAAGGGAAGGAGAAATGGTGTGAGAGAATGAAAGAAGCAGGGTTTGTGGAGGAAGTATTTGGAGAAGATGCAATAGATGGAGGTAGAGCTTTGCTGAGGAAGTATGAAAGTAACTGGGAGATGAAAGTGGAAGATGACAATAGAAGTGTTGGACTATGGTGGAAGGGACAAAGTGTTTCTTTCTGTTCTTTGTGGAAGCTGGATGGGAATGATCAGAGCTCAACATGA 1629 0.4555 MIMEPNPTPDHSLDWFEGSVSYFPPFLDYPYNSSDIQEYQLWEQDIASNYQTDTNTSSPNATNIVTITTPLETCDSNNLPLSDLPKKRSATDESSPKPPQNHKHKKIKSKPRNNEADNGDAEATTTTTATVRKSGGNKKGGAKANGNNCNNKDGRWAEQLLNPCAAAITGGNLNRVQHLLYVLHELASPTGDANHRLAAHGLKALTQHLSSSPTSTSSGSITFASAEPRFFQKTLLKFYEVSPWFSFPNNIANASILQVLGEDTDNSRTLHILDIGVSHGMQWPTFLEALSRRAGGPPPLVRLTVVTASSSTENDTPFCIGPPGDNFSSRLLGFAQSMNVNLQINKLDNCPLHSLNAQSVDASPDEIFVVCAQFRLHQLNHNAPDERSKFLTVLRNMEPKGVILSDNNLGCCCNCCGDFATGFSRRVEYLWRFLDSTSSAFKGRESEERRVMEGEAAKALTNQRETNEGKEKWCERMKEAGFVEEVFGEDAIDGGRALLRKYESNWEMKVEDDNRSVGLWWKGQSVSFCSLWKLDGNDQSST* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0346 542 Pfam GRAS domain family 158 533 IPR005202 -
Gso7g0346 542 ProSiteProfiles GRAS family profile. 148 533 IPR005202 -
Gso7g0346 542 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 533 IPR005202 -
Gso7g0346 542 MobiDBLite consensus disorder prediction 118 134 - -
Gso7g0346 542 MobiDBLite consensus disorder prediction 72 147 - -
Gso7g0346 542 MobiDBLite consensus disorder prediction 86 100 - -
Gso7g0346 542 PANTHER NODULATION-SIGNALING PATHWAY 1 PROTEIN-LIKE 4 533 IPR030015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0346 Gso-Chr7 3248456 3250676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0346 1 533 GRAS Transcription Factor Family AT3G13840 49.908 4.94e-169 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso7g0346 GRAS 7.1e-74 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0346 - - gmx:100806550 1057.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0346 7 3248456 3250676 Gso7g0346 7 3248456 3250676 ECH
Gso7g0346 7 3248456 3250676 Gso16g0060 16 681975 684173 GST
Gso7g0346 7 3248456 3250676 Gso15g0253 15 2296400 2298375 PCT
Gso7g0346 7 3248456 3250676 Gso11g3551 11 51294657 51296551 PCT