Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2586 ATGGATTCTATGGATGATCACAACATGACTATTGATCTCTTGGACACTTCAATGAGAACCATTGAAGAAGAAGGAATGATTGAAGAAGAAGGAATGATTGAAGAAGAAGAAGATGAAGATGAAGAAGAAGAAGATGATGACGATGATGATAATGGACAAAAAAAAGTGTTAACGATCGAGGAACTTGAAACGAGGATGTGGAGAGACCGGATGCTGCTGAGGAAACTTAAGGATGAGAGAAAGGAGAAAGAACAAGGGCAAACAGTGGAGATGATGAAGAAGAAGGCCTTGACTCGTGCACAAGACATTGTGCTGAAGAACATGCTCAAGATGATGGAGGTTTGTGATGTAAGGGGTTTTGTTTATGGCATAATTCCTGATAAGGGGAAGCCAGTGAGTGGTGCTTCTGATAACCTTCGTGGTTGGTGGAAGGAAAGGGTTAAGTTTGATCGTAATGGTCCTGCTGCAATGCTGAGGTATGATGAAGAAACTGGGTTTGACGACCTGCGTAATGAATTCAGTGGAGACCCATCATCAGCATACCGTTTGAGTGATCTCCCAGACACAACCCTAGGGTCACTCTTGTCATGTCTGATGCAGCACTGTGATCCCCCTCAGAGGAGGTACCCTCTAGACAAGAATGTTCCCCCACCCTGGTGGCCCACCGGGCTTGAGATCTGGTGGCCCGAGCTGGGCTTTGCTGTCGACCCAGGCCCACCTCCCTACAGGAAGCCCCATGACCTCAAGAAGGTATGGAAGCAGTGCGTGCTGACCGCAGTGATCAAGCACATCTCCCCTGACATCACCAAGATCAAAAACATGGTGCGGCTTTCGAGGACCCTTCAGGACAAGCTCACTGCCAAGGAGACTGCTATTTGGAGTGCTGTTGTGAAACGTGAAGAAACCCTTGCTAGAAGATTGCACCCTCATTTGTTCCCAGCCAAACCAATTATCAGAAGGCCTCATCATGCGATTCGTGGTTATGATATTGAAGGAAGTGGTGCTCGTGCTAGGAACTTTCTTGGGGGCCAAAGTAGTCATAACCCACCACCAACTTCCAATGTTGCTGCTCATAGTAATAATAGTATGCTTCTAGCAAGTGGAACTGCTAGAAGTTTTCTTGGTGGCCAAAGTAGTCATAATCCACAACCAACAAGCAATGTTGGTAATGGTGGTGCTAGAAATTTCTTTGGGGGGCAAAATTATCCACCACTTACTAGCAATGTTGATAGTGGTGATGGTAGAAGTTTTCTGGGAGGGCAAAATAATCCACCGCCAATAACTAGCAATGTGGCTAATGGTATTAACAATAATAATAGCATGGTTACAATGAACAATGGCATTGTTTTGCCACCAGATCATGGTGCTAATAAGAGAAAGGAAGTTCAAGGCATCACAATTCCTCATGATACCTATTCCTGCCATAGCTCTCAGTGCCCTTATCATGAAACCAGCTTTGGATTCAGTGACATGAATGTGAGGAACAATCATCAGCTGGCATGCATATACAATAATGGCAACAACAACAACAACAACATTGTGCAAGTGGTTGGTGGCGGTGGTGGAGGCTCAAGCTCTTCACAGCTTGGACCTGGAAACCCTAAAAACAATGTTAATGTGGCTCTTGGTCAATCTATGCACATTGCTGCACCAGTTGTGAATCAGACTCAGACTCAGAATCTTACTATTGGTCAACCTAGGCATAGTGCTGCACCAGCTGTGAATAATCAAAACCAGACTCTTAATGTGATCAGTGACAACAATAATTCTGGAGAAATAGGGTCAAATGGTTCGATGCACAACATGAATGTTGTTGTTCCTCTAGGAAACCAAAACCAGCAGCAGGTGCAAAATGTTCTTCAGCCTCAGGTGGTGGACAGCAACAATTTCTATGGTGGTGGAAGGGTTTCTTTGGACAAGAATAATAATAATCTCTTTGGCAACAACAGCATGAATATTAATAGTGTTCCTCCTCTTCTAGTATGCCAAAACATGCAGCAGGTGCAAAGTGTTCAGCCTCAGGTTATGGACAAGAATTTCTTTGTTGGTGGAAGGGTTTCTCTGGACAAGAATAATAATAATCTCTTTGACAACAACATGAACACTTTTCCCCTTCTAGGAAGCCAAAACATGCAGCAGGTGCAAAATGTTCATGAGCCTCAGGTTATGGACAAGAGTACTTTCTTTGGTGAAAGGGTTGGTGGTGGTTACAAGCTGAATAATGCTGATCAAGTGCATGGAGATTTTTCAACATCAACATCAATGGATCCTTCTTCCTATGATCAATGGGATGCAACTAATAATTCCCAATCTGATTTTATGGACTCTCCTTTGTTGGCAGCACCGAGCCAGGATTTCCTTTGGCTATACAATTAA 2376 0.4394 MDSMDDHNMTIDLLDTSMRTIEEEGMIEEEGMIEEEEDEDEEEEDDDDDDNGQKKVLTIEELETRMWRDRMLLRKLKDERKEKEQGQTVEMMKKKALTRAQDIVLKNMLKMMEVCDVRGFVYGIIPDKGKPVSGASDNLRGWWKERVKFDRNGPAAMLRYDEETGFDDLRNEFSGDPSSAYRLSDLPDTTLGSLLSCLMQHCDPPQRRYPLDKNVPPPWWPTGLEIWWPELGFAVDPGPPPYRKPHDLKKVWKQCVLTAVIKHISPDITKIKNMVRLSRTLQDKLTAKETAIWSAVVKREETLARRLHPHLFPAKPIIRRPHHAIRGYDIEGSGARARNFLGGQSSHNPPPTSNVAAHSNNSMLLASGTARSFLGGQSSHNPQPTSNVGNGGARNFFGGQNYPPLTSNVDSGDGRSFLGGQNNPPPITSNVANGINNNNSMVTMNNGIVLPPDHGANKRKEVQGITIPHDTYSCHSSQCPYHETSFGFSDMNVRNNHQLACIYNNGNNNNNNIVQVVGGGGGGSSSSQLGPGNPKNNVNVALGQSMHIAAPVVNQTQTQNLTIGQPRHSAAPAVNNQNQTLNVISDNNNSGEIGSNGSMHNMNVVVPLGNQNQQQVQNVLQPQVVDSNNFYGGGRVSLDKNNNNLFGNNSMNINSVPPLLVCQNMQQVQSVQPQVMDKNFFVGGRVSLDKNNNNLFDNNMNTFPLLGSQNMQQVQNVHEPQVMDKSTFFGERVGGGYKLNNADQVHGDFSTSTSMDPSSYDQWDATNNSQSDFMDSPLLAAPSQDFLWLYN* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2586 791 MobiDBLite consensus disorder prediction 27 50 - -
Gso6g2586 791 MobiDBLite consensus disorder prediction 24 57 - -
Gso6g2586 791 MobiDBLite consensus disorder prediction 339 358 - -
Gso6g2586 791 MobiDBLite consensus disorder prediction 336 358 - -
Gso6g2586 791 MobiDBLite consensus disorder prediction 748 767 - -
Gso6g2586 791 MobiDBLite consensus disorder prediction 372 434 - -
Gso6g2586 791 Gene3D - 86 161 IPR023278 GO:0003700|GO:0005634
Gso6g2586 791 Coils Coil 59 79 - -
Gso6g2586 791 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 35 660 - -
Gso6g2586 791 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 35 660 IPR006957 GO:0005634
Gso6g2586 791 Coils Coil 26 46 - -
Gso6g2586 791 SUPERFAMILY DNA-binding domain of EIN3-like 181 304 IPR023278 GO:0003700|GO:0005634
Gso6g2586 791 Gene3D - 178 311 IPR023278 GO:0003700|GO:0005634
Gso6g2586 791 Pfam Ethylene insensitive 3 60 301 IPR006957 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2586 Gso-Chr6 47643281 47646461 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2586 44 313 EIL Transcription Factor Family AT3G20770 57.609 1.37e-105 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Gso6g2586 EIN3 2.6e-104 No_clan