Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2556 ATGGCCACTGAAAAGCTTAGAAGTTGTGCAAACTTCCTTGAGAACTCTAAACCCTACTTTGCCATGATTGCTATACAATTTGGCTATGCAGGCATGAACATTATCACTAAGATTTCCCTCAACCGTGGCATGAGCCACTATGTCCTCGTTGTTTATCGTCATGCCTTTGCCACTGCTGTTGTCGCTCCATTTGCCTTCATCTTTGAAAGGAAAGCTCAACCAAGGATAACATTCCCAATTTTCATGCAAATTTTCATCCTAGCTCTACTTGGGCCAGTGATTGATCAAAACTTCTACTATGCTGGGTTGAAATTAACCTCCCCAACTTTCTCATGTGCAATGAGCAACGTGCTTCCTGCCATGACTTTTGTTATGGCAGTTTTATGCCGGATGGAGAAGATCAACATGAAGAAGGTGAGATGCCAAGCCAAGGTGGTGGGAACATTGGTGACGGTGGCTGGGGCCATGTTGATGACCTTGTACAAAGGTCCTATGGTTTGGACCAAAGATGCACCTCATAATGGGCAAATCAATAATGCAACAAATACCACAACATATTCAGACAAGGATTGGTTCATAGGCTCTATCCTCCTAATCATTGCCACTCTTGCCTGGGCATCCCTCTTTGTTTTACAAGCCAAAGCCATTGAAACCTACAAAAATCACCAGCTAAGCCTCACATCACTTATCTGCTTCATAGGCACTCTTCAAGCTATTGCAGTTACTTTTGTTATGGAACACAAGCCATCCGTGTGGACAATTGGCTGGGATATGAACTTACTTGCCGCTGCCTATGCTGGGATTGTTACATCAAGCATAACATACTATGTCCAAGGATTGGTAATTAAGAAGAAAGGGCCTGTTTTCGCAACTGCATTTAGCCCTCTGATGATGATCATTGTAGCCATCATGGGCTCCTTTATCCTTTCAGAGCAGCTTTTTCTTGGAGGTGTTCTTGGTGCTATCTTGATCGTTATAGGCTTATACTCAGTTCTTTGGGGAAAGCACAAAGAACAAGTGGTGAAGAACGAGGTAGAGGATATACCCTTGCCTGTAAAGGGTGCTCAACTTGATGGAAACCCAGAAACACTTATTGATTCCACTGATCAGAAATCTGATTCCAACAAGATCTCTTCACATATAATTAATGTGTCTATCCCTGAGCTTCCCATGAAATCTAATAACAGTTAA 1191 0.4265 MATEKLRSCANFLENSKPYFAMIAIQFGYAGMNIITKISLNRGMSHYVLVVYRHAFATAVVAPFAFIFERKAQPRITFPIFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNVLPAMTFVMAVLCRMEKINMKKVRCQAKVVGTLVTVAGAMLMTLYKGPMVWTKDAPHNGQINNATNTTTYSDKDWFIGSILLIIATLAWASLFVLQAKAIETYKNHQLSLTSLICFIGTLQAIAVTFVMEHKPSVWTIGWDMNLLAAAYAGIVTSSITYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILSEQLFLGGVLGAILIVIGLYSVLWGKHKEQVVKNEVEDIPLPVKGAQLDGNPETLIDSTDQKSDSNKISSHIINVSIPELPMKSNNS* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2556 396 Pfam EamA-like transporter family 193 332 IPR000620 GO:0016020|GO:0016021
Gso6g2556 396 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020|GO:0016021
Gso6g2556 396 PANTHER WAT1-RELATED PROTEIN 12 370 - -
Gso6g2556 396 PANTHER WAT1-RELATED PROTEIN 12 370 IPR030184 GO:0016021|GO:0022857
Gso6g2556 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Gso6g2556 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2556 Gso-Chr6 47299059 47302774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2556 1 392 Nodulin-like Gene Family AT5G07050 66.585 0.0 530
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2556 6 47299059 47302774 Gso11g2229 11 37989902 37993331 PCT
Gso11g2229 11 37989902 37993331 Gso6g2556 6 47299059 47302774 PCT