Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2550 ATGGTCCAAGAAAAGAAACTAGTTGACGAGGTGTCCGGTTGGCTCAAAATTTATGACGACGGTTCAGTGGACCGGACATGGTCCGGACCGGACCAATTCAAGTTCATGGCCGAACCGGCCCCTCCCCATGAACAATTCATAGACGGCGTTGCCATTCGCGACGTCGCCGTTACTCACGGTGGTGGCCAGAGTGGCCACCATGTCCGACTTTATCTGCCAGAGATAAAGCCGGAAGACAGCCAAAAACTACCAATTGTCCTCCATTTCCACGGCGGCGGGTTTTGCATAAGTGAACCGGACTGGTTCATGTACTACCAAGTCTACACCCGGTTCGCCCGGTCCACTCGGTCCATCGTGGTTTCCCCGTTCCTCCGCCGTGCCCCAGAGCACCGCCTCCCCGCCGCCATCGATGACGGCTTTGACACCCTCCTCTGGCTCCAAACCGTGGCCCGGTCCGGTTCACTCGAGCCGTGGCTCGAGCAACACGGTGACTTCAACCGGGTTTTCCTCATAGGAGACAGTTCTGGCGGAAACTCGGTGCATGAGGTGGCCGCGAGGGCCGGTTCGGCGGACCTAAGCCCGGTCCGGGTCGCGGGGGCAATTCCGGTTCACCCCGGTTTTGTCCGGTCCAACCGGAGCCGGTCCGAGATGGAAATGCCACAGACACCGTTTTTAACGTTGGACATGCTGGACAAGTTCTTAGCCTTGGCGCTTCCTGTTGGGGCCACCAAGGACCACCCCTTTACGTGCCCGATGGGTGAGGCGGCACCGCCACTCGAAGGGCTGAAACTGCCTCCGGTGCTGCTATGCGTGGCGGAGATGGACTTGGTGAGGGACACGGAGATGGAGTACTATGAGGCCATGAAGAAGGCCAACAAGGATGTGGAACTTTATGTTAGCAAAGGGATGACACATAGTTTTTATCTGAATAAGATTGCTGTGGATATGGACCCCAATGTTAGTGCTCAAACCGATGCTCTCATTTCTAGGATCAAGGAGTTCATTGAGAAGCACTGA 1017 0.5654 MVQEKKLVDEVSGWLKIYDDGSVDRTWSGPDQFKFMAEPAPPHEQFIDGVAIRDVAVTHGGGQSGHHVRLYLPEIKPEDSQKLPIVLHFHGGGFCISEPDWFMYYQVYTRFARSTRSIVVSPFLRRAPEHRLPAAIDDGFDTLLWLQTVARSGSLEPWLEQHGDFNRVFLIGDSSGGNSVHEVAARAGSADLSPVRVAGAIPVHPGFVRSNRSRSEMEMPQTPFLTLDMLDKFLALALPVGATKDHPFTCPMGEAAPPLEGLKLPPVLLCVAEMDLVRDTEMEYYEAMKKANKDVELYVSKGMTHSFYLNKIAVDMDPNVSAQTDALISRIKEFIEKH* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2550 338 Pfam alpha/beta hydrolase fold 86 308 IPR013094 GO:0016787
Gso6g2550 338 PANTHER ARYLACETAMIDE DEACETYLASE 3 336 - -
Gso6g2550 338 SUPERFAMILY alpha/beta-Hydrolases 6 337 IPR029058 -
Gso6g2550 338 Gene3D alpha/beta hydrolase 6 337 IPR029058 -
Gso6g2550 338 PANTHER CELL DEATH ASSOCIATED PROTEIN 3 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2550 Gso-Chr6 47241652 47243146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2550 7 328 Carbohydrate Esterase AT1G68620 35.258 5.05e-55 181
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2550 6 47241652 47243146 Gso11g2230 11 38011004 38012399 PCT
Gso11g2230 11 38011004 38012399 Gso6g2550 6 47241652 47243146 PCT