Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2022 ATGTCGTCCTCCTCCACCGTCGCCGGCGCCGACGCTCCCACTCCGTCGAAAACCCCGTCGAAGCGCAGGAGGAGCCACGTGGATTCGACTTCCCGGTTCGAGGCCTACAACCGGCTCCAGGGCGCCGCCGTGGCCTTCGGCGAGACGCTGCCGATCCCGGAGATCGTGGCGGTCGGGGGCCAGTCCGACGGGAAGAGCTCCCTCCTCGAAGCGCTCCTCGGGTTCCGTTTCAACGTCCGTGAGGTCGAGATGGGCACTCGCAGACCCCTCATATTGCAAATGGTCCACGATGCTTCCGCTCTCGAACCGCGATGCCGCTTCCAGGAGGAGGATTCAGAAGAGTATGGAAGTCCTGTGGTTTTGGCATCTGCCATTGCAGACATTATAAAGTCCCGAACTGAGGCACTTTTGAAGAAAACCAAGACAGCAGTTTCTCCTAAGCCAATTGTAATGAGAGCTGAGTATGCACATTGTCCTAACCTTACTATTATTGACACACCTGGGTTTGTTCTTAAGGCAAAGAAGGGTGAACCAGAAAACACGCCGGATGAAATCCTTTCTATGGTGAAGTCCTTGGCTAGTCCTCCTCACCGCATACTTTTGTTCCTTCAGCAAAGTAGTGTTGAGTGGTGTTCCTCATTGTGGTTGGATTCCATTCGCGAAATTGACCCAGCATTTAGACGGACAGTGATTGTTGTCTCCAAATTTGATAACCGTCTCAAGGAATTTAGTGACCGGTGGGAAGTGGATCGCTATTTGAGTGCAAGTGGTTACCTTGGAGATAACACACACCCCTTTTTTGTGGCCCTGCCAAAGGACAAGGGGAATGTTTCAAATGATGAGTTCCGCAGGCAGATTTCTCAGGTGGACTCAGAGGTTCTTCATCATCTCCGTGAGGGTGTCAAGGGAGGTTTCAATGAAGAAAAGTTCAAGTCCTCTATTGGCTTTGGCCGTTTGAGAGATTATTTGGAGTCTGAGCTTCAGAAGAAATACAAAGAAGCCACCCCAGCAACCCTTGCTTTACTCGAGCAACGATGCAATGAATTGACTTCTGAACTTGCTAGAATGGATTCAAAAATACAGGCCAATTCAGATGTTTCCCATCTCAGGAAGTTTGCAATGCTGCAAGCAGCTTCTATCAGCAATCACGTGGGTGCATTGATTGATGGTGCAGCGGATCCTTCCCCTGAGCTGTGGGGGAAAACAACTGTAGAAGAGAGGTCACGAAGTGGTATTGGGGTTTGGCCTGGTATTACTGCTGATGTAAATCCCCCCAATGCTACTCTTCGTCTTTATGGAGGTGCTGCATTTGAGAGGGTGTTGCATGAGTTTCGCTGTGCTGCGTATTCCATAGAATGCCCCTCAGTGTCAAGGGAGAAGGTTGCAAATATATTACTTGCTCACACTGGTCGAGGTGGGGGGAGAGGAATAACAGAGGCTGCTGCAGAGATTGCACGAGCTGCTGCTAAATCATGGCTTGCTCCTCTTCTTGACACTGCTTGTGACCGGCTTGCTTTTGTCTTGGGAAGTTTATTTGATTTGGCTCTAGAAAGAAACCGCAGTCATGATTCAGAATGTGGTATTAAAGGAGAAGACATGGATGGCTATGTAGGTTTCCATGCTGCTTTAAGGTGTGCTTACAATCGCTTCATAGGGGATCTTGCTAAGAAGTGCAAGCAACTTGTTAGGCACCACCTTGATTCAGTTACTTGTCCATACTCACAGGTCTGCTACTTTAATGACTCTTATAGCAAAGTCCTTGAGTTGAGTGATACTAGTTCAGCTTCCCATGATGCAAGGAGGGATCAGGAAAATATACCTCCAGAAAAAAATGCACAAGAAACTACACCAGGTAAAGCAGCAGAAACCAGAGATGTTTTGAGAGAAAGCCACATAACTATCCCTGAGACCCCATCTCCAGATCAGCCAGGTGATGCAGCATATGGGGTGGTTAAAAAGGAGCTTGGAATTTGCAATGACATGGGACCAAGAAAGAGAGCGTCCAGAATAGTAGGGAATAGCAAAAATTCTGACAATGCAAGACTGCAAAATGGTGTCATTTTATTTGGAAGTGGGGAGAGATCAGGTTCACCTTACTCAGATATCTGTGTATCAGCTGCCCAGCATTTTGCACGTATTCGTGGAGTTCTTGTTGAGAGAGGCGTGACATCAACATTAAATTCTGGATTCCTAACCCCTTGCCGAGATCGACTATTGGTGGCTCTTGGCTTAGATTTATTTGCCGTGAAAGATGAGAAATTCATGGACATGTTTGTTGCTCCTGGTGCAATAGATGTGCTAGAAAGTGAACGAGAGTCTCTTGCGAAGCGTCAGAAGATACTTCAGTCTTGCTTGAATGAGTTTAAAAATGTTGCTCGGGCTCTATGA 2388 0.4774 MSSSSTVAGADAPTPSKTPSKRRRSHVDSTSRFEAYNRLQGAAVAFGETLPIPEIVAVGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLILQMVHDASALEPRCRFQEEDSEEYGSPVVLASAIADIIKSRTEALLKKTKTAVSPKPIVMRAEYAHCPNLTIIDTPGFVLKAKKGEPENTPDEILSMVKSLASPPHRILLFLQQSSVEWCSSLWLDSIREIDPAFRRTVIVVSKFDNRLKEFSDRWEVDRYLSASGYLGDNTHPFFVALPKDKGNVSNDEFRRQISQVDSEVLHHLREGVKGGFNEEKFKSSIGFGRLRDYLESELQKKYKEATPATLALLEQRCNELTSELARMDSKIQANSDVSHLRKFAMLQAASISNHVGALIDGAADPSPELWGKTTVEERSRSGIGVWPGITADVNPPNATLRLYGGAAFERVLHEFRCAAYSIECPSVSREKVANILLAHTGRGGGRGITEAAAEIARAAAKSWLAPLLDTACDRLAFVLGSLFDLALERNRSHDSECGIKGEDMDGYVGFHAALRCAYNRFIGDLAKKCKQLVRHHLDSVTCPYSQVCYFNDSYSKVLELSDTSSASHDARRDQENIPPEKNAQETTPGKAAETRDVLRESHITIPETPSPDQPGDAAYGVVKKELGICNDMGPRKRASRIVGNSKNSDNARLQNGVILFGSGERSGSPYSDICVSAAQHFARIRGVLVERGVTSTLNSGFLTPCRDRLLVALGLDLFAVKDEKFMDMFVAPGAIDVLESERESLAKRQKILQSCLNEFKNVARAL* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2022 795 SMART dynamin_3 29 263 IPR001401 GO:0003924|GO:0005525
Gso6g2022 795 MobiDBLite consensus disorder prediction 1 30 - -
Gso6g2022 795 Gene3D - 22 388 IPR027417 -
Gso6g2022 795 Coils Coil 339 359 - -
Gso6g2022 795 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 49 336 IPR030381 GO:0005525
Gso6g2022 795 MobiDBLite consensus disorder prediction 594 624 - -
Gso6g2022 795 PANTHER DYNAMIN-LIKE PROTEIN C 29 794 - -
Gso6g2022 795 PANTHER DYNAMIN 29 794 IPR022812 -
Gso6g2022 795 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 344 IPR027417 -
Gso6g2022 795 CDD DLP_1 50 336 IPR001401 GO:0003924|GO:0005525
Gso6g2022 795 Pfam Dynamin family 55 235 IPR045063 -
Gso6g2022 795 PRINTS Dynamin signature 52 70 IPR022812 -
Gso6g2022 795 PRINTS Dynamin signature 77 94 IPR022812 -
Gso6g2022 795 PRINTS Dynamin signature 155 172 IPR022812 -
Gso6g2022 795 PRINTS Dynamin signature 224 240 IPR022812 -
Gso6g2022 795 MobiDBLite consensus disorder prediction 594 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2022 Gso-Chr6 36229360 36236281 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2022 6 36229360 36236281 Gso6g2022 6 36229360 36236281 ECH
Gso12g1255 12 23097470 23104107 Gso6g2022 6 36229360 36236281 GST