Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1749 ATGCACGAAACACATTCCATCGGCGGCGGCAGGTTCTACGGCGGCGGCGACCGGAGGCTGAGGCCGCACCACCACCAGCAGCAGCCGCCGCCGCTAAAGTGCCCACGTTGTGACTCACTCAACACCAAGTTCTGTTACTACAACAACTACAACCTTTCCCAGCCGCGCCATTTCTGCAAGAACTGCCGCCGCTACTGGACCAAGGGTGGCGTCCTCCGCAACGTCCCCGTCGGTGGCGGTTGCCGGAAATCTAAACGCTCCAACAAACCCAAAACAACCACCACCACCACCACCAGCAACACTAATAACAACCGTTCTTCTTTCTCGGCAACCGCACCGGCCACCGCACCAACGCCACCGGCACCAGAGCTGGAGCATCATTCTCATTCTCACTCCAGCAGTGAAAGCTCCACTTTAACCGTGACCGCGACGGAGGAGATGTCGGCGCCGCCGCCGACGACATCAAACGCTCCGTCGAAGAACAGTTTATTACTTGACAACGACCACCGTGAGGCGAAGATGTTCGCTAACCCTAACCCTAACCCCTCTTTGGATAGTGGTGGCATTTTCTCTGAGATAGGAAACTTCACCAGCCTCATCAATTTAAACAACAACGAAGCGTTTGGGTTTGGGAACAATAAAAATAACAACAGCATCCTCGATGCGACGTCGTTTCGTTTCGGTATTAGTGTTACTAATCAGGTGCAGGCGGCAGCAGGTGGAGGCCATGGTCAGTGGCAGCAGCAGAATCATCAGGAGTTCGGTACGGCGTCGTTTCTCGATCACACTGTGCCGCTTGAGTTTTCTTCGCTGCAGCATAAGACTGGGCATCAGGGAGGGTTTGGATCGTTGGATTGGCAACCCGGTGCGGATCAAGGTTTGTTTGATCTTCCTAACACCGTTGATCAGCCTTACTGGACCCACGCTCATTGGTCTGATCAAGATAATACTTCTTCTCTCTTTCATCTTCCTTGA 975 0.5374 MHETHSIGGGRFYGGGDRRLRPHHHQQQPPPLKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSNKPKTTTTTTTSNTNNNRSSFSATAPATAPTPPAPELEHHSHSHSSSESSTLTVTATEEMSAPPPTTSNAPSKNSLLLDNDHREAKMFANPNPNPSLDSGGIFSEIGNFTSLINLNNNEAFGFGNNKNNNSILDATSFRFGISVTNQVQAAAGGGHGQWQQQNHQEFGTASFLDHTVPLEFSSLQHKTGHQGGFGSLDWQPGADQGLFDLPNTVDQPYWTHAHWSDQDNTSSLFHLP* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1749 324 MobiDBLite consensus disorder prediction 133 163 - -
Gso6g1749 324 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 309 IPR045174 GO:0003700|GO:0006355
Gso6g1749 324 ProSitePatterns Zinc finger Dof-type signature. 34 70 IPR003851 GO:0003677|GO:0006355
Gso6g1749 324 MobiDBLite consensus disorder prediction 73 163 - -
Gso6g1749 324 MobiDBLite consensus disorder prediction 1 33 - -
Gso6g1749 324 Pfam Dof domain, zinc finger 32 86 IPR003851 GO:0003677|GO:0006355
Gso6g1749 324 PANTHER DOF ZINC FINGER PROTEIN 4 15 309 - -
Gso6g1749 324 MobiDBLite consensus disorder prediction 90 114 - -
Gso6g1749 324 ProSiteProfiles Zinc finger Dof-type profile. 32 86 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1749 Gso-Chr6 19724831 19726564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1749 17 324 C2C2-Dof Transcription Factor Family AT5G60850 40.312 1.61e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gso6g1749 zf-Dof 6.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1749 - - gmx:100818266 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1749 6 19724831 19726564 Gso6g1749 6 19724831 19726564 ECH